PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc073544.1_g010.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family NAC
Protein Properties Length: 244aa    MW: 27918.4 Da    PI: 6.3058
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc073544.1_g010.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM157.46e-4971351127
                    NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp..kkvkaeekewyfFskrdkkyatgkrknratksgyWkat 86 
                            lp+G+rF+Ptdeel+++yL+ k++g++ e+ ++i+e+d++k ePwdLp  + +++ ++ew+fF+++d+ky++g+r nrat +gyWkat
  Cse_sc073544.1_g010.1   7 LPVGYRFRPTDEELINHYLRLKINGRHDEV-TCIREIDVCKNEPWDLPdlSVIESIDNEWFFFCPKDRKYQNGERLNRATVAGYWKAT 93 
                            799************************998.89**************96447788899****************************** PP

                    NAM  87 gkdkevlsk.kgelvglkktLvfykgrapkgektdWvmheyr 127
                            gkd++++++ ++ ++g kktLvfy grapkge+t+Wv+hey 
  Cse_sc073544.1_g010.1  94 GKDRTIKTSrGSCVIGKKKTLVFYIGRAPKGERTHWVIHEYC 135
                            ******998566779**************************6 PP
Sequence ? help Back to Top
Protein Sequence    Length: 244 aa     Download sequence    
MDVLPVLPVG YRFRPTDEEL INHYLRLKIN GRHDEVTCIR EIDVCKNEPW DLPDLSVIES  60
IDNEWFFFCP KDRKYQNGER LNRATVAGYW KATGKDRTIK TSRGSCVIGK KKTLVFYIGR  120
APKGERTHWV IHEYCPTEKE LDGSHPGQSP FVLCRLFKKH DCKDENIGIS NFNDVDQSSA  180
HSPSVVKSST EDPQPSVNDS CAVASSDKTN VDPLDYLDFP QFDYNYNMKD LPDHLGSKLF  240
SPTN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G35580.19e-80NAC family protein