PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc076806.1_g010.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

FAR1

Protein Properties

Length: 254aa MW: 29409.4 Da PI: 9.7709

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc076806.1_g010.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	59.7	9.5e-19	1	94	2	89
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk......tekerrtraetrtgCkaklkvkkek.dgkwevtklele 84 +Y++YA++ GFsvr s++++ ++g + ++ +vC+keg ++ +k+ +e++ rt++ +rt C a+++ k++ + k+e++++e++ Cse_sc076806.1_g010.1 1 MYENYAEKEGFSVRLSTQNTL-KSGIVERKYLVCNKEGLPKGVNKDtmseetSETQIRTSSISRTRCMARVRFKLNAnHTKYELYDFEEN 89 6*************99998.7888*********999988888888778888899************999******* PP FAR1 85 HnHel 89 HnH++ Cse_sc076806.1_g010.1 90 HNHTF 94 *87 PP

Sequence ? help Back to Top
Protein Sequence Length: 254 aa Download sequence
MYENYAEKEG FSVRLSTQNT LKSGIVERKY LVCNKEGLPK GVNKDTMSEE TSETQIRTSS 60 ISRTRCMARV RFKLNANHTK YELYDFEENH NHTFILVVYR NLSNKRKKMS HKQQIYMQQL 120 GGTNIGATRA HHLYAATNGG YDSVDATETE FRNNKRDLNS HIGDSDAQMF ITKMENRKKN 180 VANFSFEYAV EDSQLTTLFW GDEMAKCFLK AFSKQPTLVV TDQDPAMRKA VAAVFKESKH 240 RLCMWHITNK LPFK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	9e-11	FAR1 family protein