PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc077131.1_g010.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

G2-like

Protein Properties

Length: 133aa MW: 14607.4 Da PI: 8.9799

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc077131.1_g010.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	107.2	9.1e-34	30	84	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kprlrWt +LHerFv+av++LGG++kAtPk++l+lm++kgLtl+h+kSHLQkYRl Cse_sc077131.1_g010.1 30 KPRLRWTADLHERFVDAVTKLGGPDKATPKSVLRLMGLKGLTLYHLKSHLQKYRL 84 79****************************************************8 PP
2	Myb_DNA-binding	71.2	1.6e-22	32	83	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT++++e++vdav++lGg+ t+k++ r mg kg+tl+++ks++qky+ Cse_sc077131.1_g010.1 32 RLRWTADLHERFVDAVTKLGGPdkaTPKSVLRLMGlKGLTLYHLKSHLQKYR 83 89*************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 133 aa Download sequence
MNMDGRYGGV SGGGCYEFES GGVVMTRDPK PRLRWTADLH ERFVDAVTKL GGPDKATPKS 60 VLRLMGLKGL TLYHLKSHLQ KYRLGQQAKK QNNGDPNNEN SGDSYEPYIV HSTGTSSNSL 120 RMNHEAGDIP IAD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G45580.1	8e-49	G2-like family protein