PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc078821.1_g010.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family MYB_related
Protein Properties Length: 427aa    MW: 47644.5 Da    PI: 7.7283
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc078821.1_g010.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding27.29.2e-09397424128
                            TSSS-HHHHHHHHHHHHHTTTT-HHHHH CS
        Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIa 28 
                            +g+WT+eEd  lv +++++G+g+W+ ++
  Cse_sc078821.1_g010.1 397 KGPWTPEEDITLVTYIQEHGPGNWRFVP 424
                            79**********************9776 PP
Sequence ? help Back to Top
Protein Sequence    Length: 427 aa     Download sequence    
MKKLADLYFT RVTKEAESTF CLSARQTALW RSQMEDHTSD WLRVVPIVGL GQTMNAKTYR  60
CFLCYRLGVS HFSTQMSCSA CSMVFMDDIY GDHAVSCACI IGIKHRHNVV CDTLADICSR  120
AGVSARKEVD IELCGERDKH LRPADLLLYS WERGLDVCVD LTGPSPLTQT GMTDFVAGRA  180
VIEAAQRKRV KYETKCADIG YGFTPFSFSS FGELEKEAVT LLKRIRKYSI TQEIGARGAS  240
YIFSREVDIG LYGDGDKSLR PADILLYSWD SGRDVCVDLT GSSPLTQSAL TDFMPGRAII  300
DAARRKRVKY DVKCADIGYG FLPFSFSSFG ELEKDAVTLL KRIRRFSLTQ DIGARAAVHI  360
FNRIGFAIAR DVGVQTHSTE EGEMGRPPCC DKIGVKKGPW TPEEDITLVT YIQEHGPGNW  420
RFVPTNT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G08810.18e-25MYB family protein