PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc080046.1_g010.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family FAR1
Protein Properties Length: 179aa    MW: 20371 Da    PI: 9.7798
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc080046.1_g010.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR130.61.1e-0930784790
                   FAR1 47 k......tekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90
                           +      ++k+ r+r++ r+gC  +l+++k+  + +evtk+e  HnH+l+
  Cse_sc080046.1_g010.1 30 ShrfgdvKRKQTRKRTSFRCGCSTSLTINKK-GNIYEVTKFEDGHNHPLV 78
                           1445555567788999999*********999.9***************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 179 aa     Download sequence    
QGLNEDSNGK SGDSVTDNDI SGQSEISDDS HRFGDVKRKQ TRKRTSFRCG CSTSLTINKK  60
GNIYEVTKFE DGHNHPLVAE KDMIFLKNSR KMGYTKQHFL YQVSNENFGP TVGFRLMKQV  120
YGGFDRVGAT VIDCKNQKKK ISVFIGDRDA QMAVEKLLSR KLHSPGFYVN YYKGWYCTL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.13e-09FAR1 family protein