PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc085235.1_g010.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family bHLH
Protein Properties Length: 241aa    MW: 27437.7 Da    PI: 5.4078
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc085235.1_g010.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH309.5e-1073114955
                            HHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                    HLH   9 ErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                             r RR+ri +++  L++l+P       +K++ a++Le+Av+Y+k+L+
  Cse_sc085235.1_g010.1  73 ARHRRERISERIRILQRLVPGG-----TKMDTASMLEEAVHYMKYLK 114
                            699*****************87.....8*****************95 PP
Sequence ? help Back to Top
Protein Sequence    Length: 241 aa     Download sequence    
MDLDKLPDPF SLSFSSTPPP QFRTSFKPDS MEVMREMIFQ MAAMQPVQID PEAVRPPKRR  60
NVKISKDPQS VAARHRRERI SERIRILQRL VPGGTKMDTA SMLEEAVHYM KYLKKQVQSL  120
EQGAAGGMAM VPMNKKVNVG GGYLLHNQYE TSCWTPNFAS DVDDSDEEES VDNACTEDSD  180
KNEDNEVESV GEFIHTEDNK VNHDQVEEGN IQPNDSDPHY YKKSHRNRSK WPMKSGFGTT  240
L
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
15560RPPKRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G67060.14e-38bHLH family protein