PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc092273.1_g010.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family Nin-like
Protein Properties Length: 153aa    MW: 17532.4 Da    PI: 10.9052
Description Nin-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc092273.1_g010.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1RWP-RK49.58.4e-162877350
                 RWP-RK  3 keisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWP..hRkik 50
                           +++++ed++++  +pi +A+k Lgv+ ++LKriCR+++I+ WP  +R +k
  Cse_sc092273.1_g010.1 28 ESVTMEDIQQNIGKPIGEASKRLGVSRSTLKRICRKLNIPSWPkpSRNMK 77
                           6899**************************************73356665 PP
Sequence ? help Back to Top
Protein Sequence    Length: 153 aa     Download sequence    
MTFANLNFDA VAEEKRVSAK RRRKPKMESV TMEDIQQNIG KPIGEASKRL GVSRSTLKRI  60
CRKLNIPSWP KPSRNMKYKH LSIHVVVLLL VKVKRWSCSS NRHGFEARWW ICGKHSTFPY  120
LTIEALGSSM IASSSKESDD SIETLHPIPK RDL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G64530.18e-09Nin-like family protein