PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc100248.1_g010.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family MYB_related
Protein Properties Length: 162aa    MW: 17958.2 Da    PI: 6.6829
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc100248.1_g010.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding22.13.6e-07119146128
                            TSSS-HHHHHHHHHHHHHTTTT-HHHHH CS
        Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIa 28 
                            r ++T+ E e +v+av+ +G+g+W+ + 
  Cse_sc100248.1_g010.1 119 RRPFTKSEVEAFVEAVEIHGPGRWREVK 146
                            679*********************9985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 162 aa     Download sequence    
MGISHNSDLG TLGFTLDSTF RKASPPSPIS QEPQLSLASP ITDVGPSNSS IYHDLETYLD  60
KYTDTNQESI PTKTEVLTEE KVAVSKAIVP VTAVTTKAFS DILGNYNPKK KEVSQRRIRR  120
PFTKSEVEAF VEAVEIHGPG RWREVKLHAF SDADHRTCVD LK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G07540.11e-22MYB_related family protein