PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc107702.1_g010.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

FAR1

Protein Properties

Length: 226aa MW: 26077.2 Da PI: 8.8955

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc107702.1_g010.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	65.5	1.4e-20	1	95	2	90
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk......tekerrtraetrtgCkaklkvkkek.dgkwevtklele 84 +Y++YA+++GFsvr s++++ ++g + ++ +vC+keg ++ +k+ +e++ rt++ +rtgC a++k k+++ + k+e++++e++ Cse_sc107702.1_g010.1 1 MYENYAEKAGFSVRLSTQNTL-KSGIVERKYLVCNKEGLPKGVNKDtmseetSETQIRTSSISRTGCMARVKFKLNSdHTKYELYNFEEN 89 6*************99998.7888*********999988888888778888899*************99******* PP FAR1 85 HnHela 90 HnH++ Cse_sc107702.1_g010.1 90 HNHTFI 95 *986 PP

Sequence ? help Back to Top
Protein Sequence Length: 226 aa Download sequence
MYENYAEKAG FSVRLSTQNT LKSGIVERKY LVCNKEGLPK GVNKDTMSEE TSETQIRTSS 60 ISRTGCMARV KFKLNSDHTK YELYNFEENH NHTFIPVVYR NLSKKRKKMS HKQQIYMQQL 120 GGPNIGATRA HHLYAATNGG YDSVDATETE FRNNKRDLNS HIGDSDAQML ITKMENRKKH 180 VANFSFEYAV EDSELTALFW ADEMAKYNYR EFGDTISFDA TFRTNI

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	104	108	KKRKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-22	FAR1 family protein