PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc114241.1_g010.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

NF-YC

Protein Properties

Length: 197aa MW: 22017.1 Da PI: 4.7198

Description

NF-YC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc114241.1_g010.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NF-YC	166.3	3.9e-52	28	121	8	101
NF-YC 8 kqiekatdfknhelPlarikkilkadedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtdifdflvdi 95 ++ e++tdf+nh+lPlarikki+kadedv+misaeaP+++++ace+fileltlrsw+h+eenkrrtl+k+diaaa+trtdifdflvdi Cse_sc114241.1_g010.1 28 EEFEQTTDFNNHSLPLARIKKIMKADEDVRMISAEAPIIFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDI 115 5689********************************************************************************** PP NF-YC 96 vprdel 101 vpr++l Cse_sc114241.1_g010.1 116 VPRKDL 121 *986 PP

Sequence ? help Back to Top
Protein Sequence Length: 197 aa Download sequence
MMGNVPPASV GGSVPPSQTS GLTSPPYEEF EQTTDFNNHS LPLARIKKIM KADEDVRMIS 60 AEAPIIFARA CEMFILELTL RSWNHTEENK RRTLQKNDIA AAITRTDIFD FLVDIVPRKD 120 LKDEIIASTV PRGGPLPVGA PTEGLPYYYI PPTQIRASGM YMGNPVDPQA LYGQQPRAYM 180 AQPMWPQQQQ QEPQEDA

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	91	97	RRTLQKN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G54830.3	2e-73	NF-YC family protein