PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc114891.1_g010.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family FAR1
Protein Properties Length: 213aa    MW: 25058.8 Da    PI: 10.2121
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc114891.1_g010.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR134.66.2e-114713090
                   FAR1 30 krtfvCskegkreeekkk......tekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHela 90
                           ++  +C+keg +++ + +      ++k++r+++ + tgCka++++++++ + k+++ ++  +HnH l 
  Cse_sc114891.1_g010.1  4 HKYIMCNKEGIPRRINIDtldpqnSDKQKRNTTLHITGCKARIRLELDQvSRKYKLVQFIPKHNHVLI 71
                           56679*****999877777888888899999999*******************************996 PP
Sequence ? help Back to Top
Protein Sequence    Length: 213 aa     Download sequence    
MVQHKYIMCN KEGIPRRINI DTLDPQNSDK QKRNTTLHIT GCKARIRLEL DQVSRKYKLV  60
QFIPKHNHVL IPKEYKHFTK KQRRMTQADK MFIVKAATNK IGATRAHNFL TSLKGGYEYV  120
HGTSDDFKNH QRDINAFIGE SDAEMLINKM ENRKMYVPNF TFQYKVQNSE LVAMFWADEV  180
AKCNYKEFGD IVSFDATFRS NVPHGICTIH WRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.17e-22FAR1 family protein