PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc116514.1_g010.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family B3
Protein Properties Length: 224aa    MW: 25171.2 Da    PI: 9.4173
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc116514.1_g010.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B336.21.1e-1182173798
                            .-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE.. CS
                     B3   7 psdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliy..rkksgryvltkGWkeFvkangLkegDfvvFkldgrsefel 92 
                            + + + +++l+lp +f++   ++++e   +++++++g++ ++ ++   r ks +y l+ GW  F + n++ +gD +vFk++ ++++ +
  Cse_sc116514.1_g010.1  82 TISITHKHMLRLPPDFVALARIDTKE--NIIMKSLDGNESQMAVRPdkRFKSAQYNLSLGWVAFKQRNNISQGDECVFKYITSEDKMC 167
                            566778899*******9766766555..69999****99999996633445555***************************9888877 PP

                            EEEEE- CS
                     B3  93 vvkvfr 98 
                            + k+++
  Cse_sc116514.1_g010.1 168 LAKIIK 173
                            777765 PP
Sequence ? help Back to Top
Protein Sequence    Length: 224 aa     Download sequence    
MISLDGSENQ MAIRKGKRHV ASTLYQLSEG WRAFMHSNNI SQGDKCVLKY ITSEDKMCLA  60
KIIKAPATKV DVNDGDPSFV VTISITHKHM LRLPPDFVAL ARIDTKENII MKSLDGNESQ  120
MAVRPDKRFK SAQYNLSLGW VAFKQRNNIS QGDECVFKYI TSEDKMCLAK IIKAPATKVD  180
VNDGDPSFVV TISITHKHML RLPPDFVALA RIDTKENIIM KSLD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G26680.11e-09B3 family protein