PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc127579.1_g010.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

LBD

Protein Properties

Length: 155aa MW: 17171.3 Da PI: 4.4437

Description

LBD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc127579.1_g010.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF260	35.7	2.5e-11	4	54	50	100
DUF260 50 peeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallkee 100 p + re a+ ++ yeA+ar+ +Pv+G+v++i +l q +++l+ el +++++ Cse_sc127579.1_g010.1 4 PVNCRELAVLTISYEAQARLANPVHGCVETIIALYQVVASLQMELLAVQTQ 54 56679999*************************************999987 PP

Sequence ? help Back to Top
Protein Sequence Length: 155 aa Download sequence
LQLPVNCREL AVLTISYEAQ ARLANPVHGC VETIIALYQV VASLQMELLA VQTQLLNSRP 60 TVANTLHGSL QQPEPIQHFE LQPMYSIGSP ASTNNTINMY PSDSSLPNVA DCQNNVHLQP 120 SFHPFQLSRP QSQNGDKDEE NQEFVAFLDQ MLQSG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G03760.1	1e-21	LBD family protein