PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc129827.1_g010.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family NAC
Protein Properties Length: 127aa    MW: 14854.7 Da    PI: 8.0167
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc129827.1_g010.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM73.55.1e-2313101190
                    NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratk.sgyWkatg 87 
                            l pG+rF Ptd+el+v+yL++k+e++kl+    i+e  iy+++P++L +k+ + e++wyf ++r++  ++g+r++r+tk +++Wk+ g
  Cse_sc129827.1_g010.1  13 LLPGYRFCPTDQELIVNYLQPKLESRKLPP-ARIHEEFIYDYNPEELARKYLSAENKWYFMTPRERMCPNGDRPKRTTKnDAFWKT-G 98 
                            579************************999.66**************987778899********************7764899995.4 PP

                    NAM  88 kdk 90 
                            + k
  Cse_sc129827.1_g010.1  99 NAK 101
                            433 PP
Sequence ? help Back to Top
Protein Sequence    Length: 127 aa     Download sequence    
NINQSNRDYV DDLLPGYRFC PTDQELIVNY LQPKLESRKL PPARIHEEFI YDYNPEELAR  60
KYLSAENKWY FMTPRERMCP NGDRPKRTTK NDAFWKTGNA KVEKCKTAGL MTEYTTTDPN  120
LPVGNGT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G61110.19e-21NAC family protein