PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc135037.1_g010.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family WRKY
Protein Properties Length: 181aa    MW: 20246.2 Da    PI: 6.5148
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc135037.1_g010.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY91.75.7e-2990148259
                            --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
                   WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                            +D ++WrKYGqK++kgs++pr+YY+C+++  C ++k+ve+s++d +++++ Y+geH h+
  Cse_sc135037.1_g010.1  90 NDTWAWRKYGQKPIKGSPYPRNYYKCSTTkACGARKQVEQSNTDSTIFIVSYSGEHIHP 148
                            7*************************99889***************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 181 aa     Download sequence    
MEGLASENDM NLFSYSNSSE NPLEGLEEVY KEGCSQPLTT NTAVMSFDDE QQLVQDAGSS  60
SFTIETPTRK RKNQQKKVVV ELTQEELSNN DTWAWRKYGQ KPIKGSPYPR NYYKCSTTKA  120
CGARKQVEQS NTDSTIFIVS YSGEHIHPRP THRSPLAGST RSNKFATGNV PPISEDNTTH  180
S
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G52830.15e-41WRKY family protein