PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc163817.1_g010.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family FAR1
Protein Properties Length: 241aa    MW: 27717.6 Da    PI: 8.4757
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc163817.1_g010.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR171.71.7e-2253146190
                   FAR1   1 kfYneYAkevGFsvrkskskks.krngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek...dgkwevtklele 84 
                            +fY++YAk++GFsvr+++++ +    + +t+r+f C + g+++ + +++++ +r+r+++r+gC+a +++ +++     +w+++ ++++
  Cse_sc163817.1_g010.1  53 EFYCSYAKQCGFSVRRNRTRGKdGVGKGVTRRDFICHRGGYPHFKPSEDVNVQRNRKSSRCGCQAYMRIVRRSdfnVPEWRIIGFSND 140
                            6****************99987456677********************9*******************99998776789********* PP

                   FAR1  85 HnHela 90 
                            HnHel+
  Cse_sc163817.1_g010.1 141 HNHELS 146
                            ****97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 241 aa     Download sequence    
MMEETSENST DLSADDIGTI EEIPENSILS RQGSVNLVPF IGQRFVSQEA AYEFYCSYAK  60
QCGFSVRRNR TRGKDGVGKG VTRRDFICHR GGYPHFKPSE DVNVQRNRKS SRCGCQAYMR  120
IVRRSDFNVP EWRIIGFSND HNHELSKSMD VQMPLPAYCA MSADDKSRIC MFAKAGMSVR  180
QMLRLMELEK GVKLGCLLFT EIDVRNLLQS FRTVDRDNDA IDLLKMCKDK KDKDPKFQYN  240
F
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G10240.12e-76FAR1 family protein