PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc167635.1_g010.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family GATA
Protein Properties Length: 167aa    MW: 18687.8 Da    PI: 10.6242
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc167635.1_g010.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA57.51.8e-1874107134
                   GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkg 34 
                            C +C  tkTp+WR gp g+ktLCnaCG++y++ +
  Cse_sc167635.1_g010.1  74 CMHCEITKTPQWRAGPLGPKTLCNACGVRYKSGR 107
                            99*****************************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 167 aa     Download sequence    
MIPLSPIQRG PQRARSKRPR PATFNPRAMI ELLSPMILVP KKPKILGPTE EIGNQNENQN  60
YNQNQSGGQG LRKCMHCEIT KTPQWRAGPL GPKTLCNACG VRYKSGRLFP EYRPAASPTF  120
IPTLHSNSHK KVVEMRTMFG PSDKMAIVKT EPEPELIPNM NPAVSYN
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
11721KRPRP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G54810.21e-42GATA family protein