PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc171087.1_g010.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family FAR1
Protein Properties Length: 198aa    MW: 22676.8 Da    PI: 9.8533
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc171087.1_g010.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR152.12.1e-16293590
                   FAR1  5 eYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk......tekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnH 87
                           +YA+++GF vrks +k+  r+g ++++ +vC++eg ++  + +      ++k++r+++ + tgCka+++ ++   ++k+++  +++ HnH
  Cse_sc171087.1_g010.1  2 KYASKAGFVVRKSCQKRL-RSGIVKQKYLVCNREGCPKGIHVDtldlenSDKQKRSSNLHITGCKARVMFELIPgSSKYKLXVFDSIHNH 90
                           7***********998887.8898*************99988888999888899999999***************9*************** PP

                   FAR1 88 ela 90
                           el 
  Cse_sc171087.1_g010.1 91 ELE 93
                           *96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 198 aa     Download sequence    
MKYASKAGFV VRKSCQKRLR SGIVKQKYLV CNREGCPKGI HVDTLDLENS DKQKRSSNLH  60
ITGCKARVMF ELIPGSSKYK LXVFDSIHNH ELERKEYKHL SKTERQLTYA EQLFIVKAAS  120
VNIGATRAHH LLTGLKGSYL LVHGTTVDFK NFFRSVNCYI GDSDAQMLIA KMENRQKHVP  180
DFSFDYLVQN DVCSFYSN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.18e-08FAR1 family protein