PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc172706.1_g010.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family WRKY
Protein Properties Length: 135aa    MW: 15160.1 Da    PI: 9.8903
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc172706.1_g010.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY92.14.3e-2961117259
                            --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
                   WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                            +DgynWrKYGqK+vk se++rsYY+Ct+++Cpvkkkver    + v+ei+++g+Hnhe
  Cse_sc172706.1_g010.1  61 EDGYNWRKYGQKQVKRSEYTRSYYKCTHQSCPVKKKVERGV-GGLVTEIINKGKHNHE 117
                            8****************************************.9**************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 135 aa     Download sequence    
RSLGMSHQQA LAHVTAKAAQ LQPIPTTHHR VPPPMPDHNV TMMAPDSHSH PPLVAADKPA  60
EDGYNWRKYG QKQVKRSEYT RSYYKCTHQS CPVKKKVERG VGGLVTEIIN KGKHNHEPPR  120
TVGNLNDIEP FNDQT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G13960.22e-37WRKY family protein