PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc177160.1_g010.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family ARF
Protein Properties Length: 207aa    MW: 23532.1 Da    PI: 8.3598
Description ARF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc177160.1_g010.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B346.18.6e-1537973499
                           SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS
                     B3 34 ktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99
                           +t+  +d  g+ W++++i+r++   ++l +GW++Fv++++L +gD++vF   +++++e +v+++r+
  Cse_sc177160.1_g010.1 37 QTMEAKDIYGEIWKFRHIFRRT---HLLMTGWSSFVNQKKLVAGDSIVFL--RTENGEICVGIRRA 97
                           378889***********88777...58888********************..559999*****997 PP
2Auxin_resp26.62.5e-101762053765
             Auxin_resp  37 vkvsvGmRfkmafetedsserrl.sGtvvg 65 
                            ++ ++ mRfkmafe edss++++ +Gtv++
  Cse_sc177160.1_g010.1 176 IHSCARMRFKMAFEIEDSSRISWfMGTVAS 205
                            567899**********************87 PP
Sequence ? help Back to Top
Protein Sequence    Length: 207 aa     Download sequence    
MSRKAKDYAA YSSHEPCCEM GMTIFPHLDY AVDSPVQTME AKDIYGEIWK FRHIFRRTHL  60
LMTGWSSFVN QKKLVAGDSI VFLRTENGEI CVGIRRAKIG GVNGPEFLPG LNSYPKNTVS  120
FYGAFPSYLR ENENKLMRSG SNRNMNIDYG GRGKVRPEDV IEATSLILEC LLPMCIHSCA  180
RMRFKMAFEI EDSSRISWFM GTVASNE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G30080.13e-57ARF family protein