PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc192640.1_g010.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family FAR1
Protein Properties Length: 234aa    MW: 26827.5 Da    PI: 8.575
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc192640.1_g010.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR159.97.9e-1966146290
                   FAR1   2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHel 89 
                             Y++YA e+GF vr+ ++++    g +++++f Cskeg+++ ++ k     r r++ rt+Cka++ v ++  +k++v+++ +eHnH +
  Cse_sc192640.1_g010.1  66 AYKDYAAEAGFIVRRGHQTND--GGIVMNKEFLCSKEGTKKVKTVK-----RIRSKFRTNCKARIYVVRS-GEKYRVKNFAKEHNHGF 145
                            6***************98877..999*************9998777.....89999***********999.9**************98 PP

                   FAR1  90 a 90 
                            +
  Cse_sc192640.1_g010.1 146 F 146
                            6 PP
Sequence ? help Back to Top
Protein Sequence    Length: 234 aa     Download sequence    
MRQNCASNEF VEDENLSADV NVEENEEVNS PDFFTSTSML IKPVVVKTLV PVEGTLFDSV  60
EEVYKAYKDY AAEAGFIVRR GHQTNDGGIV MNKEFLCSKE GTKKVKTVKR IRSKFRTNCK  120
ARIYVVRSGE KYRVKNFAKE HNHGFFTAED RHLQKSHRPM SLAHQYFAIK ASNLNIGPCM  180
SFNFIVEILG GFENVGATKI DFKNMSRDIY SYIGKYDAQM IIDKFSILKE RDEN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.11e-16FAR1 family protein