PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc215676.1_g010.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family FAR1
Protein Properties Length: 206aa    MW: 23870.4 Da    PI: 10.0114
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc215676.1_g010.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR130.99.2e-101696789
                   FAR1  7 AkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHel 89
                           A+++GF +++ ksk+    g  ++ +f+Cs++g++++e  + ++ +r++++++++C  +l  k  k  + w +      HnH++
  Cse_sc215676.1_g010.1 16 AESIGFVIVIGKSKTD--RGYKYSIEFKCSRHGTSSREGLE-DELQRQTSTDKCNCPFRLLAKFIKsFNGWILRVKCPGHNHNF 96
                           899*********9998..5667***************9999.888999999************9997788988888899***86 PP
Sequence ? help Back to Top
Protein Sequence    Length: 206 aa     Download sequence    
VFGTEVDLIN WVRSTAESIG FVIVIGKSKT DRGYKYSIEF KCSRHGTSSR EGLEDELQRQ  60
TSTDKCNCPF RLLAKFIKSF NGWILRVKCP GHNHNFPDSL HGFSQAMRLK ESELVFVRQM  120
TKQRVAPRII LSSIKEMDPN NVSTIKTVYN AQEKIRRDSR GGLTPIQLLL VHLRRKGYTY  180
YPRINDHTNE LDEIFFVHPT SYALWT
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1153159EKIRRDS