PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc227351.1_g010.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family Nin-like
Protein Properties Length: 167aa    MW: 19409.6 Da    PI: 7.6668
Description Nin-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc227351.1_g010.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1RWP-RK22.22.7e-07130534
                 RWP-RK  5 isledlskyFslpikdAAkeLgvclTvLKr 34
                           +s e++++++ +++k+AAkeLgv++++LKr
  Cse_sc227351.1_g010.1  1 LSREEIERHYGKTMKEAAKELGVSVSTLKR 30
                           6789*************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 167 aa     Download sequence    
LSREEIERHY GKTMKEAAKE LGVSVSTLKR WHNNLCKSGW QGPDLLQRKA YNSNKNQSKE  60
SHTHEKNNGV IQDPSPVKKX ENTVFKAEYA DDKIILHLPI SEATFVTVKN EIGERFKLED  120
GTFKIKFLDK DEEWILMDSD QDLSYCIQNS RNVDRSAFQL RVLLHNQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G24020.15e-12Nin-like family protein