PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc231466.1_g010.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family GRAS
Protein Properties Length: 175aa    MW: 19921.5 Da    PI: 4.5011
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc231466.1_g010.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS139.73e-4321746178
                   GRAS   6 lecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkf 93 
                            l  A+ +++++l  a + L++l +++s +gd++qR+aayf+ +L arl+   s   + +  ++++    ++e+ a+  +++vsP+++f
  Cse_sc231466.1_g010.1   2 LVSATSLDENKLDSAVENLSELYQNVSLSGDSVQRVAAYFADGLVARLLTRRSPFHEMIMKEPSP----EDEFLAYMELYKVSPYYQF 85 
                            55689999*****************************************9666666655555554....788888899********** PP

                   GRAS  94 shltaNqaIleavege.....ervHiiDfdisqGlQWpaLlqaLasRp..egppslRiTgvgspesgskeeleetgerLakfAeel.g 173
                            +h+taNq I+ea+e+e     +++H++D+d+++G+QWp+L+q+L++++  ++  slR+Tg+g+      e leet+ rL  f +++ +
  Cse_sc231466.1_g010.1  86 AHFTANQIIMEAFEREekdnnRALHVVDLDVGYGFQWPSLMQSLSDKAitGNRVSLRVTGFGE----TLEGLEETEARLVGFSKTFkN 169
                            **************9977777789***********************9977788*********....99***************9845 PP

                   GRAS 174 vpfef 178
                            + fef
  Cse_sc231466.1_g010.1 170 LIFEF 174
                            77877 PP
Sequence ? help Back to Top
Protein Sequence    Length: 175 aa     Download sequence    
LLVSATSLDE NKLDSAVENL SELYQNVSLS GDSVQRVAAY FADGLVARLL TRRSPFHEMI  60
MKEPSPEDEF LAYMELYKVS PYYQFAHFTA NQIIMEAFER EEKDNNRALH VVDLDVGYGF  120
QWPSLMQSLS DKAITGNRVS LRVTGFGETL EGLEETEARL VGFSKTFKNL IFEFK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G48150.12e-25GRAS family protein