PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc233367.1_g010.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

NF-YC

Protein Properties

Length: 113aa MW: 12826.5 Da PI: 4.7829

Description

NF-YC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc233367.1_g010.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NF-YC	49.1	1.3e-15	1	37	65	101
NF-YC 65 haeenkrrtlkksdiaaavtrtdifdflvdivprdel 101 h+eenkrrtl+k+diaaa+trtdifdflvdivpr++l Cse_sc233367.1_g010.1 1 HTEENKRRTLQKNDIAAAITRTDIFDFLVDIVPRKDL 37 9*********************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 113 aa Download sequence
HTEENKRRTL QKNDIAAAIT RTDIFDFLVD IVPRKDLKDE IITSTVPRGR PLPVGAPTEG 60 LPYYYMPPTQ IGASGMYMGN PVDPQALYGQ QPRPYMAQPM WPQQQQQEPQ EDA

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	7	13	RRTLQKN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G08970.3	4e-33	NF-YC family protein