PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc304090.1_g010.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family NF-YC
Protein Properties Length: 120aa    MW: 13587.6 Da    PI: 4.3567
Description NF-YC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc304090.1_g010.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YC94.21.2e-29255861
                  NF-YC  8 kqiekatdfknhelPlarikkilkadedvkmisaeaPvllskacelfileltlr 61
                           ++ie++tdfknh+lPlarikki+kadedv+mis eaPv++++ace+fileltlr
  Cse_sc304090.1_g010.1  2 EEIEQTTDFKNHSLPLARIKKIMKADEDVRMISVEAPVIFARACEMFILELTLR 55
                           579**************************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 120 aa     Download sequence    
YEEIEQTTDF KNHSLPLARI KKIMKADEDV RMISVEAPVI FARACEMFIL ELTLRGGPLP  60
VGAPTEGLPY YYMPPTQIGA SGMYMGNPVD PQALYGQQPR PYMAQPMWPQ QQQQEPQEDA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G54830.38e-37NF-YC family protein