PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc326722.1_g010.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

C2H2

Protein Properties

Length: 120aa MW: 13736.7 Da PI: 10.3163

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc326722.1_g010.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	15.8	4e-05	14	36	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC C+k + +Lk H++ + Cse_sc326722.1_g010.1 14 HKCDTCSKAYAAEVDLKAHLKIC 36 79******************987 PP
2	zf-C2H2	11.5	0.00093	44	60	5	21
TTTEEESSHHHHHHHHH CS zf-C2H2 5 dCgksFsrksnLkrHir 21 Cg+ F+ k++L+ H+ Cse_sc326722.1_g010.1 44 SCGMKFKKKYDLNLHMD 60 6**************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 120 aa Download sequence
KKHYLRKHVT EKNHKCDTCS KAYAAEVDLK AHLKICGKKK HKCSCGMKFK KKYDLNLHMD 60 HYCSARRLNG ATNHSSRNEM GNNSANVTRN NNTGSFMIGS TLSYPPTFNM ERNSDRITIN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G66730.1	4e-16	C2H2 family protein