PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc333044.1_g010.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family ARF
Protein Properties Length: 179aa    MW: 20052.1 Da    PI: 8.9243
Description ARF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc333044.1_g010.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B362.56.7e-2015783499
                           SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS
                     B3 34 ktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99
                           +t+ ++d +g+ W++++iyr++++r++lt+GW++Fv+ ++L +gD++vF   +  ++el+v+++r+
  Cse_sc333044.1_g010.1 15 QTILVKDVHGEIWKFRHIYRGTPRRHLLTTGWSNFVNHKKLVAGDSIVFL--RAANGELCVGIRRA 78
                           4899**********************************************..3489999*****97 PP
2Auxin_resp898.5e-30108177270
             Auxin_resp   2 ahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrl.sGtvvgvsdld 70 
                            ++ a  +++FevvY+Prast+eF+vk++ v++a+++++++GmRfkm fetedss++++ +Gtv+gv+  d
  Cse_sc333044.1_g010.1 108 VNHALDAEAFEVVYYPRASTPEFCVKASTVKAAMRIQWCPGMRFKMPFETEDSSRISWfMGTVSGVQVED 177
                            677778899*********************************************************9866 PP
Sequence ? help Back to Top
Protein Sequence    Length: 179 aa     Download sequence    
TIFPRLDYAA DPPVQTILVK DVHGEIWKFR HIYRGTPRRH LLTTGWSNFV NHKKLVAGDS  60
IVFLRAANGE LCVGIRRAKR GIGGGFFDIP NAYNVGCKAS VESVIEAVNH ALDAEAFEVV  120
YYPRASTPEF CVKASTVKAA MRIQWCPGMR FKMPFETEDS SRISWFMGTV SGVQVEDQI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G30080.16e-78ARF family protein