PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cz01g26120.t1
Organism
Chromochloris zofingiensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Sphaeropleales; Chromochloridaceae; Chromochloris
Family NF-X1
Protein Properties Length: 270aa    MW: 29422.1 Da    PI: 5.9216
Description NF-X1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cz01g26120.t1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-NF-X120.78.8e-07249267120
       zf-NF-X1   1 CGkHkCqklCHeGpCppCpq 20 
                    CG H+C  lCH+GpCppCp+
  Cz01g26120.t1 249 CG-HPCLLLCHPGPCPPCPR 267
                    **.****************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 270 aa     Download sequence    
MDTAGWSTMP HVTSGRGRGA ASASSMGWDD SDDSLEEQQV CEYSLAWDST TVHLGFAIVK  60
GPLVQHHSQV LTLSCAWQDG THTAVQSGMF EQYLEACHDL ASQDKHDRDD VFARGLARVQ  120
EYLSAARDNS MCLICLGAIK PAEAIWHCHE SCHAVFHLTC IQEWARNQKD AAAYRASTRL  180
SPEHFPTAAD EARAAAEWGC PKCRHAYPAA DIPSEYTCFC GKCADPEWDP WLAPHTCGEI  240
CGKPLAGRCG HPCLLLCHPG PCPPCPRIT*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G05660.11e-31NF-X1 family protein