PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cz01g29250.t1
Organism
Chromochloris zofingiensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Sphaeropleales; Chromochloridaceae; Chromochloris
Family MYB_related
Protein Properties Length: 309aa    MW: 33871.1 Da    PI: 9.9895
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cz01g29250.t1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding43.76.4e-1491135347
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      +WT+eE+ l++ + +++G+g+W+ Iar     Rt+ q+ s+ qky
    Cz01g29250.t1  91 PWTEEEHRLFLMGLAKFGKGDWRNIARNYVVSRTPTQVASHAQKY 135
                      8*******************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 309 aa     Download sequence    
MLSCRDEEHK RFEIALAQFY RDPHRFQRIA ELLPGKTLAD IQLCFQRLQA DVANIQEGRI  60
QFTEYSGSGS DASEPPQKKL KDVTDRKKGV PWTEEEHRLF LMGLAKFGKG DWRNIARNYV  120
VSRTPTQVAS HAQKYFIRLN QINKVGPAIT KRDKKRASIH DMAAVPEPAT LPSAAAAPLA  180
PGQTAATATA AATGPSTEPA LATQPQAPHQ QLVASQQQTH MAANPPLPVQ QQQQQQQQYP  240
VMQQQLTAPP GTAPIAVHLS APPQQLLPLP AGMSLPLPHL LPPMGMLLPH QMPLGMPMPP  300
HPPFMVQM*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G38090.15e-46MYB family protein