PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cz01g31240.t1

Organism

Chromochloris zofingiensis

Taxonomic ID

31302

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Sphaeropleales; Chromochloridaceae; Chromochloris

Family

MYB

Protein Properties

Length: 501aa MW: 53817.3 Da PI: 8.0224

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cz01g31240.t1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	52.7	9.5e-17	21	76	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT........TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmg........kgRtlkqcksrwqkyl 48 +g WT++Ede l+++v q+G g+W+tI+r ++ gR +kqc++rw+ +l Cz01g31240.t1 21 KGGWTEDEDEALKQLVSQHGEGNWSTISRALNeqfnkgieDGRIGKQCRERWNHHL 76 688*************************************************9886 PP
2	Myb_DNA-binding	56.7	5.7e-18	82	124	1	45
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 +++WT+eE+ +lv a++++G++ W+ Ia+ ++ gRt++ +k++w+ Cz01g31240.t1 82 KDAWTPEEEGQLVSAHQMYGNR-WSDIAKLIP-GRTENAVKNHWN 124 679*****************.*****.*********8 PP

Sequence ? help Back to Top
Protein Sequence Length: 501 aa Download sequence
MAGSMVAKGS RRRRYPVAKV KGGWTEDEDE ALKQLVSQHG EGNWSTISRA LNEQFNKGIE 60 DGRIGKQCRE RWNHHLRPDI RKDAWTPEEE GQLVSAHQMY GNRWSDIAKL IPGRTENAVK 120 NHWNATLRRK DPHNKGQYGC FPTVLRCYMV QLGLLQPQHS NHQQETSDDY HDHDDVDHDH 180 NHHMHASAYL KQQMQPHIVD GVGQLPVTST RSCPSSPVVA AEGHVVAVKA VSHEPTLFKP 240 SSSGGSSPAN SLQGVKRPRS VQIASARRRK RSSMDKVCVD DAAPNTPTSA EPCSSCDTIV 300 SGIGAHAAAP ASPSKPVSGL AHQHHTARSC LTLLPSVDSS TMPVKCELDP VKVNSRRGST 360 GGSCVTGHQC QADHKQQQPQ RARCGSILSI RPLDIGLPAA CNCAAEPHAA AASGWDSDAD 420 HVTDIQVAEL MLALRAAPVC LNGRLPAGAA GGIMPAVADD AGPVGLGGVQ CNQRSRSWPG 480 HELPEAGNCR MDRAVGVCVD *

Sequence ? help Back to Top

Protein Sequence Length: 501 aa Download sequence

MAGSMVAKGS RRRRYPVAKV KGGWTEDEDE ALKQLVSQHG EGNWSTISRA LNEQFNKGIE  60
DGRIGKQCRE RWNHHLRPDI RKDAWTPEEE GQLVSAHQMY GNRWSDIAKL IPGRTENAVK  120
NHWNATLRRK DPHNKGQYGC FPTVLRCYMV QLGLLQPQHS NHQQETSDDY HDHDDVDHDH  180
NHHMHASAYL KQQMQPHIVD GVGQLPVTST RSCPSSPVVA AEGHVVAVKA VSHEPTLFKP  240
SSSGGSSPAN SLQGVKRPRS VQIASARRRK RSSMDKVCVD DAAPNTPTSA EPCSSCDTIV  300
SGIGAHAAAP ASPSKPVSGL AHQHHTARSC LTLLPSVDSS TMPVKCELDP VKVNSRRGST  360
GGSCVTGHQC QADHKQQQPQ RARCGSILSI RPLDIGLPAA CNCAAEPHAA AASGWDSDAD  420
HVTDIQVAEL MLALRAAPVC LNGRLPAGAA GGIMPAVADD AGPVGLGGVQ CNQRSRSWPG  480
HELPEAGNCR MDRAVGVCVD *

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G11050.1	2e-39	MYB family protein