PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cz01g38030.t1

Organism

Chromochloris zofingiensis

Taxonomic ID

31302

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Sphaeropleales; Chromochloridaceae; Chromochloris

Family

MYB

Protein Properties

Length: 840aa MW: 92777.2 Da PI: 8.3994

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cz01g38030.t1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	40.7	5.5e-13	8	53	2	48
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 g W Ede+l+ av ++G ++W++I++ + ++++kqck rw+ +l Cz01g38030.t1 8 GVWKNTEDEILKAAVMKYGLNQWARISSLLV-RKSAKQCKARWYEWL 53 78***************************.**********986 PP
2	Myb_DNA-binding	33.5	1e-10	60	103	2	48
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 WT eEde+l+++ k+l++ W+tIa +g Rt+ qc +r+ k+l Cz01g38030.t1 60 TEWTREEDEKLLHLAKLLPTQ-WRTIAPIVG--RTPAQCLERYDKLL 103 68***************99.****8..********8875 PP

Sequence ? help Back to Top
Protein Sequence Length: 840 aa Download sequence
MRIMIKGGVW KNTEDEILKA AVMKYGLNQW ARISSLLVRK SAKQCKARWY EWLDPSIKKT 60 EWTREEDEKL LHLAKLLPTQ WRTIAPIVGR TPAQCLERYD KLLDMAMGKD DSYDPADDPR 120 RLRPGEIDPN PESKPARPDP VDMDEDEKEM LAEARARLAN TRGKKAKRKA REKQLEEARR 180 LAALQKRREL KAAGIEMRGK DRRSRGIDYS AEVAFEKKPA PGFFDTADEQ RTAKQMQQEF 240 RPVTIEEMEG KRRRDIEEGL IKNDLKRQKL ADSHNAPSLV ARVNELNSTA PKRRTKMMLP 300 APQITESELE AIARMGDGAA LEEEMAQGAG GEATRQLLGQ YGQTPARFAT PMRTPRVAAA 360 GGQDAVMLQA QNLARINAMQ TPLFGGDNPD LNDSDFSGIN PRPLTSATPN PLALAATPMV 420 GATPGRGGSG QLLGLTPARS GSGSIAGVSS TPSIAGTPMR GGAGAGPIGG MMGATPIRDA 480 LGLNELDPLS FDTKRLQKQH QLEVRSDLKA GLASLPAPEN EYSVAVPELP DEDEAGDAVV 540 MEEDAADVKA RRLREVEARR AEEEKKKSKA LQRHLPRPVS LDQLPAPQHP AQAAQLSYRE 600 AAEQELLSEL TAVLQHDAAR YPIKDKKDKK DKRAAPTAMG AEGPPLQQFE LAELEHAAEL 660 VRSETDFVIN AMGHASVSHQ DYMDAWATVS KDLTWLPSQG KYGRAASATN QERLESIRAE 720 FEAVRSLMEK EAVRAHKLEK KANVVIQGLQ QRDVKLASQV ADMAEQLQNA KIELVCFQAL 780 RAQEVRSAPE RLERLHAAAD EQQRRESDLQ DKYKLLTQQR GDLLDQLRHH AKAAAVHAS*

Sequence ? help Back to Top

Protein Sequence Length: 840 aa Download sequence

MRIMIKGGVW KNTEDEILKA AVMKYGLNQW ARISSLLVRK SAKQCKARWY EWLDPSIKKT  60
EWTREEDEKL LHLAKLLPTQ WRTIAPIVGR TPAQCLERYD KLLDMAMGKD DSYDPADDPR  120
RLRPGEIDPN PESKPARPDP VDMDEDEKEM LAEARARLAN TRGKKAKRKA REKQLEEARR  180
LAALQKRREL KAAGIEMRGK DRRSRGIDYS AEVAFEKKPA PGFFDTADEQ RTAKQMQQEF  240
RPVTIEEMEG KRRRDIEEGL IKNDLKRQKL ADSHNAPSLV ARVNELNSTA PKRRTKMMLP  300
APQITESELE AIARMGDGAA LEEEMAQGAG GEATRQLLGQ YGQTPARFAT PMRTPRVAAA  360
GGQDAVMLQA QNLARINAMQ TPLFGGDNPD LNDSDFSGIN PRPLTSATPN PLALAATPMV  420
GATPGRGGSG QLLGLTPARS GSGSIAGVSS TPSIAGTPMR GGAGAGPIGG MMGATPIRDA  480
LGLNELDPLS FDTKRLQKQH QLEVRSDLKA GLASLPAPEN EYSVAVPELP DEDEAGDAVV  540
MEEDAADVKA RRLREVEARR AEEEKKKSKA LQRHLPRPVS LDQLPAPQHP AQAAQLSYRE  600
AAEQELLSEL TAVLQHDAAR YPIKDKKDKK DKRAAPTAMG AEGPPLQQFE LAELEHAAEL  660
VRSETDFVIN AMGHASVSHQ DYMDAWATVS KDLTWLPSQG KYGRAASATN QERLESIRAE  720
FEAVRSLMEK EAVRAHKLEK KANVVIQGLQ QRDVKLASQV ADMAEQLQNA KIELVCFQAL  780
RAQEVRSAPE RLERLHAAAD EQQRRESDLQ DKYKLLTQQR GDLLDQLRHH AKAAAVHAS*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G09770.1	0.0	MYB family protein