PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cz01g40030.t1

Organism

Chromochloris zofingiensis

Taxonomic ID

31302

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Sphaeropleales; Chromochloridaceae; Chromochloris

Family

Nin-like

Protein Properties

Length: 973aa MW: 101763 Da PI: 5.8904

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cz01g40030.t1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	72.7	4.6e-23	560	609	3	52
RWP-RK 3 keisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 +++ edl+++F l +k+AA +Lg+c+T+LKr+CR++GI RWP+R+i++l Cz01g40030.t1 560 RKLTYEDLQAQFGLGLKEAAANLGICATTLKRACRRNGITRWPRRQIAKL 609 5899*******************************************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 973 aa Download sequence
MQASSRVQTS DTQDSNQVKA RLSRALFDFN AKLASSKSGA LVQIWMPEVC ADGSVVLSAQ 60 GLPFAVAGVG DLLALFRCVS CRYRFSTDCM KPSLMGAIGR VYSSCEPEMS HNVQKYDKQV 120 YLRVSEAQRC RVHSTLVMPV FDGDNRCKPL AVFELVQSDK DVVFPEVISW LRSCLEEVHM 180 MTADPDISSV SIGLRKWPME VDQMLMEPLR SNSAGRLLLE NDVDDDDDTA CHKPSHSYQS 240 VQHSIHKLSL PSARAANTGT GHAGSGVNHV TGGTSPNNVG GGMGSNRNSE EGAGENDDAQ 300 SHPAQQLQHQ QHQQHQQQFV QQGSLQHAGS NTQPAQQNTV TAAAVAAPPA TSSPATQQQQ 360 EQQQPTSLPV PLQSAGGVSA LPAPSPFSDP NLMAALAAAA VANNPSALQA LQALQQQQQQ 420 QQQQPSASGQ AAPQAPVVNI GSLLASSMQS LINQHAMQAL KSLQDQLTAA SQGSNAPNLN 480 GLTVLTAGLS GPQRSLKRAV STQALNVSRS GTQTHNNLGV KDEDEDEDLG DSDSDEGGKG 540 REGNYEMRRH GSSRPLGAGR KLTYEDLQAQ FGLGLKEAAA NLGICATTLK RACRRNGITR 600 WPRRQIAKLS RALNQMGYQG APPATLVQSA MANNVQPSTL PVPLGSVQVQ PQQQQQQYSS 660 MSAPSLQPSL PIAIPPGLST STGMPGTMPG GSGPVGSGSI NGGLLSASLG SGQHLAAGGG 720 AQSSYPHLGG SAPFSNLLNG QLQGEQQPAG AFNQAFPNQF TRQGSGPTTS NSSGHPSPAG 780 ATATVAATAN GYATAPEGPV SMPYSTPPME TSTSGGYTQE QQQQMQQQQH SYTQALASAP 840 LHAPALSSQI DADIFDSLDP PSFTANLPVG TNLSFSGPSI PGAKPINSSN LSNFLADMDA 900 ASLEGFLDLL QDDFLTDGNL LHDVHMASLC EPGCAPASVG FGTVLGKTLV NGVAGMEGIE 960 HEVVKAETSQ PF*

Sequence ? help Back to Top

Protein Sequence Length: 973 aa Download sequence

MQASSRVQTS DTQDSNQVKA RLSRALFDFN AKLASSKSGA LVQIWMPEVC ADGSVVLSAQ  60
GLPFAVAGVG DLLALFRCVS CRYRFSTDCM KPSLMGAIGR VYSSCEPEMS HNVQKYDKQV  120
YLRVSEAQRC RVHSTLVMPV FDGDNRCKPL AVFELVQSDK DVVFPEVISW LRSCLEEVHM  180
MTADPDISSV SIGLRKWPME VDQMLMEPLR SNSAGRLLLE NDVDDDDDTA CHKPSHSYQS  240
VQHSIHKLSL PSARAANTGT GHAGSGVNHV TGGTSPNNVG GGMGSNRNSE EGAGENDDAQ  300
SHPAQQLQHQ QHQQHQQQFV QQGSLQHAGS NTQPAQQNTV TAAAVAAPPA TSSPATQQQQ  360
EQQQPTSLPV PLQSAGGVSA LPAPSPFSDP NLMAALAAAA VANNPSALQA LQALQQQQQQ  420
QQQQPSASGQ AAPQAPVVNI GSLLASSMQS LINQHAMQAL KSLQDQLTAA SQGSNAPNLN  480
GLTVLTAGLS GPQRSLKRAV STQALNVSRS GTQTHNNLGV KDEDEDEDLG DSDSDEGGKG  540
REGNYEMRRH GSSRPLGAGR KLTYEDLQAQ FGLGLKEAAA NLGICATTLK RACRRNGITR  600
WPRRQIAKLS RALNQMGYQG APPATLVQSA MANNVQPSTL PVPLGSVQVQ PQQQQQQYSS  660
MSAPSLQPSL PIAIPPGLST STGMPGTMPG GSGPVGSGSI NGGLLSASLG SGQHLAAGGG  720
AQSSYPHLGG SAPFSNLLNG QLQGEQQPAG AFNQAFPNQF TRQGSGPTTS NSSGHPSPAG  780
ATATVAATAN GYATAPEGPV SMPYSTPPME TSTSGGYTQE QQQQMQQQQH SYTQALASAP  840
LHAPALSSQI DADIFDSLDP PSFTANLPVG TNLSFSGPSI PGAKPINSSN LSNFLADMDA  900
ASLEGFLDLL QDDFLTDGNL LHDVHMASLC EPGCAPASVG FGTVLGKTLV NGVAGMEGIE  960
HEVVKAETSQ PF*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G24020.1	2e-14	Nin-like family protein