PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cz02g08120.t1
Organism
Chromochloris zofingiensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Sphaeropleales; Chromochloridaceae; Chromochloris
Family Whirly
Protein Properties Length: 237aa    MW: 25838.6 Da    PI: 8.6572
Description Whirly family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cz02g08120.t1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Whirly96.82.2e-30772112133
         Whirly   2 vyktkaalkvkavrptfealdsgnlklkraGglllelanataerkydWekkqsfalsatevaelvdlaskesceffhdpaakgsneGkvrkalkv. 96 
                    vyk+k+a+++ka++pt+e l  g   ++r+G +lle+a at+er+y W++k + als+te+ +++  ++ es +f+hdp + g++eGk+ k+l+  
  Cz02g08120.t1  77 VYKSKSAMTLKAIKPTWEGLSNGGWAVSREGKMLLEFASATGERTYGWDNKINVALSSTELCTILA-SPDESHDFYHDPDKMGADEGKMTKSLRWs 171
                    9************************************************************99874.7899**********************972 PP

         Whirly  97 ePlpdGs.Glfvnlsvtnslvkgnesf..svPvskaefav 133
                    +    G  G+++ l vt++   g ++    v ++ +ef  
  Cz02g08120.t1 172 KATGTGRaGYYIALYVTEKTPMGPQKKecGVSLTPGEFYQ 211
                    55667778*********99877655432267777777755 PP
Sequence ? help Back to Top
Protein Sequence    Length: 237 aa     Download sequence    
MLHMRCMSLS SKVAAAKRPL GLLVKQQLHG RPTRQICSAQ AVYSPQAAPP ATTDNYYAGG  60
SDADKAQGSA VFVDWTVYKS KSAMTLKAIK PTWEGLSNGG WAVSREGKML LEFASATGER  120
TYGWDNKINV ALSSTELCTI LASPDESHDF YHDPDKMGAD EGKMTKSLRW SKATGTGRAG  180
YYIALYVTEK TPMGPQKKEC GVSLTPGEFY QFKVLVEYCI PRLLGFDYLL DQPVGV*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G71260.14e-22Whirly family protein