PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cz02g14080.t1

Organism

Chromochloris zofingiensis

Taxonomic ID

31302

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Sphaeropleales; Chromochloridaceae; Chromochloris

Family

MYB_related

Protein Properties

Length: 1214aa MW: 125512 Da PI: 8.873

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cz02g14080.t1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	48.9	1.5e-15	25	69	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 r rWT +E++++v++ +++G W+++a+++g +t+ q++s+ qk+ Cz02g14080.t1 25 RERWTDDEHLRFVEGMRLHGRQ-WRKVAEHVG-SKTAVQIRSHAQKH 69 78****************77.*****.**********98 PP

Sequence ? help Back to Top
Protein Sequence Length: 1214 aa Download sequence
MATSQSDQSY RPSQGKRQYV INKPRERWTD DEHLRFVEGM RLHGRQWRKV AEHVGSKTAV 60 QIRSHAQKHF SKQDKGNVSD SERIDVPPPR PKRLPFPSRS MSGPTGMEQM SLGDQGAGQV 120 QSQPPSNAFA EKMARSIAFN MTQWMQSQAG GDQPPGSDGK SMQTVEAVAA AAAAAAAAAA 180 TAVIQAAGPA VQEKIHEKAA QGFLPFLIHP LADMIPAGLV QPSPTPSLGA LTAGQHQQQQ 240 QQQQQRQQQR QQQQMRDHKF GRPAGSEANA APDAMSGQLQ SDSRPASVPR LGSGPSSGVL 300 GGGSLASTYT RSANPGSATP SAANAGSTAP TPLPPAAAAA AHVKRVKEPA AATGVADDSG 360 APTGLMTQQA AAKWPWYGGA LGGHAAAGAG FGLGGMPLSS SNMQDLQTQL ALMQHLAIVG 420 SSTHSNAFKT EILNWQRTLQ GHINPLLQAM SLQGMGEQQQ QAIRERQQQF ATSLPGAFQH 480 YLQSPLSGAL AAQSVGNALD GLGSWQLDLP SCHGGNQMRD SSSQQQQQQK DVVGNVSEQH 540 AAAQGCTSTA PNSLLGELGD DALPPVRRRS DPGTSYNRQQ QSACTAKDTD QVAINDGRVT 600 DACKADRTGR STPAETADGN DPARGSPLKH DSSDGTQQQH LAAQQMTAYH AVGFGLPPVA 660 STGSCIDTLA QMQQWQAAAV GYGLQSVSAG LRGSGPAAAP PAYMPYSMLA AAAAAAATGA 720 SQGQDATANL SGIHGLRQQQ GAGVPPHNLG GYPSTLGSSG APPQQDNNAN PRNTSSSRSK 780 AQLIGAFSPP RVPHNSSTAG RPADRDRPEG QDKEGRGVAN SQAGSLGGKQ AGKATASGSD 840 GVAGSKKCPQ PVPAFLDAQG YHASQDKEPG GRKRSMSDLY GFAQRARKHQ RRKHRAGSPT 900 RSVGSGASSS GFHCGGDRSG GEEANCPQVN RYPAAAGAAA VGSGGQDGDQ QDTATSAGEL 960 QPGSMYERLA AGAAQTPLSA SGVKAEAMTA CRSNARVLSF ENRQHGSRSA GTGSSGGNGT 1020 GTSGDLCDGS LNGSDEGSNE PGSVPPADPP GRVGGTTIGK RSIMHTDAAE QGDQGCRSFS 1080 VVQPSHQNAR SCHPSEHAVH AVDVGPHSMH AQQHQQQSAA AGQGLLLTQS TIAGGPYISP 1140 GGGHRHMEPH DGHATEHLQH KGKRARFDGH HDHVTAVSKV VAEGSGCLDP DNKDHEPTSR 1200 RSSGYVPSLG KWM*

Sequence ? help Back to Top

Protein Sequence Length: 1214 aa Download sequence

MATSQSDQSY RPSQGKRQYV INKPRERWTD DEHLRFVEGM RLHGRQWRKV AEHVGSKTAV  60
QIRSHAQKHF SKQDKGNVSD SERIDVPPPR PKRLPFPSRS MSGPTGMEQM SLGDQGAGQV  120
QSQPPSNAFA EKMARSIAFN MTQWMQSQAG GDQPPGSDGK SMQTVEAVAA AAAAAAAAAA  180
TAVIQAAGPA VQEKIHEKAA QGFLPFLIHP LADMIPAGLV QPSPTPSLGA LTAGQHQQQQ  240
QQQQQRQQQR QQQQMRDHKF GRPAGSEANA APDAMSGQLQ SDSRPASVPR LGSGPSSGVL  300
GGGSLASTYT RSANPGSATP SAANAGSTAP TPLPPAAAAA AHVKRVKEPA AATGVADDSG  360
APTGLMTQQA AAKWPWYGGA LGGHAAAGAG FGLGGMPLSS SNMQDLQTQL ALMQHLAIVG  420
SSTHSNAFKT EILNWQRTLQ GHINPLLQAM SLQGMGEQQQ QAIRERQQQF ATSLPGAFQH  480
YLQSPLSGAL AAQSVGNALD GLGSWQLDLP SCHGGNQMRD SSSQQQQQQK DVVGNVSEQH  540
AAAQGCTSTA PNSLLGELGD DALPPVRRRS DPGTSYNRQQ QSACTAKDTD QVAINDGRVT  600
DACKADRTGR STPAETADGN DPARGSPLKH DSSDGTQQQH LAAQQMTAYH AVGFGLPPVA  660
STGSCIDTLA QMQQWQAAAV GYGLQSVSAG LRGSGPAAAP PAYMPYSMLA AAAAAAATGA  720
SQGQDATANL SGIHGLRQQQ GAGVPPHNLG GYPSTLGSSG APPQQDNNAN PRNTSSSRSK  780
AQLIGAFSPP RVPHNSSTAG RPADRDRPEG QDKEGRGVAN SQAGSLGGKQ AGKATASGSD  840
GVAGSKKCPQ PVPAFLDAQG YHASQDKEPG GRKRSMSDLY GFAQRARKHQ RRKHRAGSPT  900
RSVGSGASSS GFHCGGDRSG GEEANCPQVN RYPAAAGAAA VGSGGQDGDQ QDTATSAGEL  960
QPGSMYERLA AGAAQTPLSA SGVKAEAMTA CRSNARVLSF ENRQHGSRSA GTGSSGGNGT  1020
GTSGDLCDGS LNGSDEGSNE PGSVPPADPP GRVGGTTIGK RSIMHTDAAE QGDQGCRSFS  1080
VVQPSHQNAR SCHPSEHAVH AVDVGPHSMH AQQHQQQSAA AGQGLLLTQS TIAGGPYISP  1140
GGGHRHMEPH DGHATEHLQH KGKRARFDGH HDHVTAVSKV VAEGSGCLDP DNKDHEPTSR  1200
RSSGYVPSLG KWM*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G17300.1	2e-22	MYB_related family protein