PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cz03g21260.t1

Organism

Chromochloris zofingiensis

Taxonomic ID

31302

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Sphaeropleales; Chromochloridaceae; Chromochloris

Family

MYB_related

Protein Properties

Length: 1433aa MW: 156125 Da PI: 5.6698

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cz03g21260.t1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	33.2	1.2e-10	756	799	2	47
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 g W++ Ed+ll++av+ G + W ++a++++ gR q+++r+ ++ Cz03g21260.t1 756 GTWSQHEDLLLLHAVASCGRN-WPAVAARVP-GRNTQQVRDRFSQV 799 89***************66.*****.********9775 PP

Sequence ? help Back to Top
Protein Sequence Length: 1433 aa Download sequence
MSSDSEYGFD ADEALELEQL KEVLGDKYRT YQASPLHRTD TSDSEYDPDD DLDVNSSESD 60 DGFHDKTPNP AQPGSQPKQH QAMRASAKQH SISHYRRGHG AAALQHMAST TAEDGQPGIS 120 PVLEHTTEDG DDNGGVSAEI AAAARPSTYD DDGAAWDYTG YDANADDDDD QLLSQQDGDA 180 DGMDAAADEY LGLDGLGGEL VGWLANDGGA AAATQTPGDL PGGYQQQHQH DVHKASTSQP 240 QQPRHRKKAV KQQAAKPTAA NVAASAVDAL ETAGDADVDA DVDADMAELE VLRDNQKLLD 300 MLAVYEQEQQ DLISPLHSKQ ALRQQSEQQQ PPQQDAAQPR PQATTQAVHH LPRIHRHHEQ 360 TPNTSAHQQH SFNAEQVSPD HAAEQQAVGC AATGDAASLS IGGVGQQSAV DAAAASTDML 420 PAEQEPPAPL VAMQQALSHN RTLQAGLKKV LAAVDQAMAA NWTKQGQIRS AIMKKKQEQR 480 SAGVTAVARL AGAEANLRAP PIDPGPLVSK FWSVPGVSHP AVHPEAVALQ SRLPFFDRAL 540 TGKLGKWTAS EVDALKQGVK AAAVQLLYEQ DLQALEALAD INMNDMRAFQ QRADELKTLT 600 LDDSRLQDAA ARLSDVHWNS IASRHVKEHS ASDCRQYFVN HLSQNALKEW SLEEKKKLRQ 660 LALSHNERQW HVIAEELGTG RPAAVCLRVY VTELRSDVGN RKRSATPRLD QHQRARLQVL 720 VAKHGQDWHR IGAELDLAPH QAQSQWQRSQ TENSTGTWSQ HEDLLLLHAV ASCGRNWPAV 780 AARVPGRNTQ QVRDRFSQVL DPNVTKGPFS VKELTALEEL VAESEAAYGR ISWKFVSQAL 840 PTPRSRQQCR AAWQGVQQAK IQLAGSQDDA KAVFAERMKR RSSQVAATAV NEALVSQDQS 900 VNWDVEPLML PFPKAVHLPM VEDVHRMTLQ KYLVNPLPKT VCRAIYVEVP ERPLMPSPHQ 960 YHQFNMWLQA HQRDQERYFM QTQQLKQEVA SAGLAPHASA PTATQVSTSG GNNDQQLQPQ 1020 PQQQQPQQQL GGEPVNGDEQ QQQQQHQQLH QDVHVMQMAL WVLQSNVVQQ HNVEANHQRQ 1080 SDQLQQPIQG KTLHSNQRSS KRRRTCTNKE THHHADTAVP VEAQQQQQTM QSAPAACDHV 1140 DVADIHATTG MPDECTISTQ ARDVRMHPGN LIPPPVRLKY PIPPQDPYRD DMHHSFMQWA 1200 QQQQEGIAAL LDYKRTRLEA AHQAAAAAEA AGRDAEDDDM DEQQQHDPAV ALTGPMARAE 1260 AVAPFDAATA PTTTAVDGVA AIAQVPATTV PNNGHMIADQ QQFMETSQSA TAQATPAAAA 1320 AGTEAAAGAA GADGAAGADA GCRGGAAGAG AGAAASSLPN KKKRTYIRPP LVDRLTRDVH 1380 NLESGQMLLN LYTMFLMLFP APQLYGLITE WAQEVGEVLK ESDLTLTELK QR*

Sequence ? help Back to Top

Protein Sequence Length: 1433 aa Download sequence

MSSDSEYGFD ADEALELEQL KEVLGDKYRT YQASPLHRTD TSDSEYDPDD DLDVNSSESD  60
DGFHDKTPNP AQPGSQPKQH QAMRASAKQH SISHYRRGHG AAALQHMAST TAEDGQPGIS  120
PVLEHTTEDG DDNGGVSAEI AAAARPSTYD DDGAAWDYTG YDANADDDDD QLLSQQDGDA  180
DGMDAAADEY LGLDGLGGEL VGWLANDGGA AAATQTPGDL PGGYQQQHQH DVHKASTSQP  240
QQPRHRKKAV KQQAAKPTAA NVAASAVDAL ETAGDADVDA DVDADMAELE VLRDNQKLLD  300
MLAVYEQEQQ DLISPLHSKQ ALRQQSEQQQ PPQQDAAQPR PQATTQAVHH LPRIHRHHEQ  360
TPNTSAHQQH SFNAEQVSPD HAAEQQAVGC AATGDAASLS IGGVGQQSAV DAAAASTDML  420
PAEQEPPAPL VAMQQALSHN RTLQAGLKKV LAAVDQAMAA NWTKQGQIRS AIMKKKQEQR  480
SAGVTAVARL AGAEANLRAP PIDPGPLVSK FWSVPGVSHP AVHPEAVALQ SRLPFFDRAL  540
TGKLGKWTAS EVDALKQGVK AAAVQLLYEQ DLQALEALAD INMNDMRAFQ QRADELKTLT  600
LDDSRLQDAA ARLSDVHWNS IASRHVKEHS ASDCRQYFVN HLSQNALKEW SLEEKKKLRQ  660
LALSHNERQW HVIAEELGTG RPAAVCLRVY VTELRSDVGN RKRSATPRLD QHQRARLQVL  720
VAKHGQDWHR IGAELDLAPH QAQSQWQRSQ TENSTGTWSQ HEDLLLLHAV ASCGRNWPAV  780
AARVPGRNTQ QVRDRFSQVL DPNVTKGPFS VKELTALEEL VAESEAAYGR ISWKFVSQAL  840
PTPRSRQQCR AAWQGVQQAK IQLAGSQDDA KAVFAERMKR RSSQVAATAV NEALVSQDQS  900
VNWDVEPLML PFPKAVHLPM VEDVHRMTLQ KYLVNPLPKT VCRAIYVEVP ERPLMPSPHQ  960
YHQFNMWLQA HQRDQERYFM QTQQLKQEVA SAGLAPHASA PTATQVSTSG GNNDQQLQPQ  1020
PQQQQPQQQL GGEPVNGDEQ QQQQQHQQLH QDVHVMQMAL WVLQSNVVQQ HNVEANHQRQ  1080
SDQLQQPIQG KTLHSNQRSS KRRRTCTNKE THHHADTAVP VEAQQQQQTM QSAPAACDHV  1140
DVADIHATTG MPDECTISTQ ARDVRMHPGN LIPPPVRLKY PIPPQDPYRD DMHHSFMQWA  1200
QQQQEGIAAL LDYKRTRLEA AHQAAAAAEA AGRDAEDDDM DEQQQHDPAV ALTGPMARAE  1260
AVAPFDAATA PTTTAVDGVA AIAQVPATTV PNNGHMIADQ QQFMETSQSA TAQATPAAAA  1320
AGTEAAAGAA GADGAAGADA GCRGGAAGAG AGAAASSLPN KKKRTYIRPP LVDRLTRDVH  1380
NLESGQMLLN LYTMFLMLFP APQLYGLITE WAQEVGEVLK ESDLTLTELK QR*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G18100.1	4e-14	MYB family protein