PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cz03g24070.t1

Organism

Chromochloris zofingiensis

Taxonomic ID

31302

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Sphaeropleales; Chromochloridaceae; Chromochloris

Family

C3H

Protein Properties

Length: 578aa MW: 62890.1 Da PI: 7.9992

Description

C3H family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cz03g24070.t1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-CCCH	22.9	1.5e-07	224	246	4	26
---SGGGGTS--TTTTT-SS-SS CS zf-CCCH 4 elCrffartGtCkyGdrCkFaHg 26 + C+f+ tG C G+ C++aH Cz03g24070.t1 224 PVCKFWVNTGRCAKGSACPYAHL 246 68********************6 PP

Sequence ? help Back to Top
Protein Sequence Length: 578 aa Download sequence
MQIVSLQGQI TYKRAVSKKL VFYDLLVTQH QHQHLREPCA DQQTWAELVV KEGYYGTVEQ 60 VKTLRDTLRL GDVVLVKGQQ ENDHSLLVHS LLVLQTWASQ HSAVAFLPQP NANHKQAQLH 120 RKRQQPQLQQ QQSAAAAISK NGVGTFEVPS STLAMHVGTA ASTPMSKSDD LNHAKVDRTD 180 VSEPSTTASR TSAAHVALDA LGFDGMDNCT VSTESHLQLL PPAPVCKFWV NTGRCAKGSA 240 CPYAHLQPAV LVPARRKWMK QREHEKRVIA SSFGYVHHDN AASKRHRAKV FCQWLVDTFG 300 KQVLNAGSGV LDVAGGQGAV SCELQVVHGV KTTLVDPRPF KFSRVQRTDF KTRGITATVQ 360 YESLTPMNQA ADHTRGRLSG NDEADPSACS DVLIDSMGAV TNPCESRRMS AAGTDNSVGL 420 AGMAHPACNV SADTSVMDPA ALAGADAASG SNEQDAPQIV FHQLQGLFEK QLWQSSRWKD 480 LLSNCSVVIG MHPDQATEPI LQFALQSGKA LAVVPCCVFP RQFPNRTILN LNGEQQGVTQ 540 YAELLDYLLQ QSSGQKQALP FEGANQVVFR TSICQSY*

Sequence ? help Back to Top

Protein Sequence Length: 578 aa Download sequence

MQIVSLQGQI TYKRAVSKKL VFYDLLVTQH QHQHLREPCA DQQTWAELVV KEGYYGTVEQ  60
VKTLRDTLRL GDVVLVKGQQ ENDHSLLVHS LLVLQTWASQ HSAVAFLPQP NANHKQAQLH  120
RKRQQPQLQQ QQSAAAAISK NGVGTFEVPS STLAMHVGTA ASTPMSKSDD LNHAKVDRTD  180
VSEPSTTASR TSAAHVALDA LGFDGMDNCT VSTESHLQLL PPAPVCKFWV NTGRCAKGSA  240
CPYAHLQPAV LVPARRKWMK QREHEKRVIA SSFGYVHHDN AASKRHRAKV FCQWLVDTFG  300
KQVLNAGSGV LDVAGGQGAV SCELQVVHGV KTTLVDPRPF KFSRVQRTDF KTRGITATVQ  360
YESLTPMNQA ADHTRGRLSG NDEADPSACS DVLIDSMGAV TNPCESRRMS AAGTDNSVGL  420
AGMAHPACNV SADTSVMDPA ALAGADAASG SNEQDAPQIV FHQLQGLFEK QLWQSSRWKD  480
LLSNCSVVIG MHPDQATEPI LQFALQSGKA LAVVPCCVFP RQFPNRTILN LNGEQQGVTQ  540
YAELLDYLLQ QSSGQKQALP FEGANQVVFR TSICQSY*