PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cz05g13060.t1
Organism
Chromochloris zofingiensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Sphaeropleales; Chromochloridaceae; Chromochloris
Family C3H
Protein Properties Length: 402aa    MW: 41267.4 Da    PI: 5.012
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cz05g13060.t1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH17.66.7e-062543826
                   GGGGTS--TTTTT-SS-SS CS
        zf-CCCH  8 ffartGtCkyGdrCkFaHg 26
                   + +++G C++Gd C+FaHg
  Cz05g13060.t1 25 YQFKNGCCRRGDACPFAHG 43
                   7789999***********9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 402 aa     Download sequence    
MSGAQRDVVF DLDAAAFSSD DFRMYQFKNG CCRRGDACPF AHGVFECWLH PSRYRTQMCT  60
DGVGCKRRVC FFAHAESELR KPEEDPVWLQ QQMQAEMAAE QQVQQQVEAL KIFSALLGQN  120
QTTTAGAAAP STNASVAELL KNLPALLSTL GNNSATAAPS VAPKPPTAPA TPPALEETVR  180
QLVQQLQGQA APPSASTRAS LLQLVNLLEK PVAPAPVPVP APTTSSTAAQ LQQLVNLLAD  240
KNGADQQVNT EPVAKPATPP AAGSASDVLK NHPALLEALA MLTAPAAAPT PAASQPLSAT  300
LQQLQLAASA LESGTAETTA APAVPATVST PPSAETMAQA LLAAASGAVA ASGGNVTLTA  360
NQGSGDHKQA TADALAAMLQ PEEETAASAA SPHFARSGDR H*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G19810.17e-25C3H family protein