PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cz05g21080.t1
Organism
Chromochloris zofingiensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Sphaeropleales; Chromochloridaceae; Chromochloris
Family MYB
Protein Properties Length: 130aa    MW: 15140.4 Da    PI: 10.4613
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cz05g21080.t1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding431.1e-131152245
                     SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS
  Myb_DNA-binding  2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45
                     g+W ++Edell+    +lG++ W+ +a++++ gRt+ qc  rw+
    Cz05g21080.t1 11 GAWEKDEDELLYLWQGKLGNK-WSEVAKHIP-GRTGQQCAQRWR 52
                     89*******************.*********.***********8 PP
2Myb_DNA-binding52.79.6e-1761107148
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                      r++WT++Ed  l+++v+ +G g+W+ Iar +  gRt+ qc  rw+ +l
    Cz05g21080.t1  61 RDKWTEDEDNTLIELVRSYGIGRWADIARQLS-GRTDQQCMGRWRRHL 107
                      79******************************.************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 130 aa     Download sequence    
MVNNPFSVKT GAWEKDEDEL LYLWQGKLGN KWSEVAKHIP GRTGQQCAQR WRHKVNPNIK  60
RDKWTEDEDN TLIELVRSYG IGRWADIARQ LSGRTDQQCM GRWRRHLDPS IRRVRPVLLL  120
LLLLPLPSS*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G02320.21e-24MYB family protein