PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cz06g08120.t1

Organism

Chromochloris zofingiensis

Taxonomic ID

31302

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Sphaeropleales; Chromochloridaceae; Chromochloris

Family

MYB

Protein Properties

Length: 699aa MW: 77685.7 Da PI: 6.7584

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cz06g08120.t1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	46.9	6.2e-15	7	51	1	45
TSSS-HHHHHHHHHHHHHTTTT.-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg.tWktIartmgkgRtlkqcksrwq 45 + rWT eE++ll ++v+++G + +W Ia ++ g+t+kqc++r+ Cz06g08120.t1 7 KVRWTNEEHDLLCELVEKYGINcNWPQIADHFK-GKTGKQCRERYM 51 679***************99******9.********97 PP
2	Myb_DNA-binding	45.2	2.2e-14	62	103	3	46
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 +WT+eEd+ll++++k++G+ W + + ++ gR+++++k++w+ Cz06g08120.t1 62 PWTAEEDLLLIEGHKLYGTQ-WVRMNHLFP-GRSDNDIKNHWNA 103 7***************99.*****.*********95 PP

Sequence ? help Back to Top
Protein Sequence Length: 699 aa Download sequence
MSAGIRKVRW TNEEHDLLCE LVEKYGINCN WPQIADHFKG KTGKQCRERY MYHGPHIAKP 60 HPWTAEEDLL LIEGHKLYGT QWVRMNHLFP GRSDNDIKNH WNAVMRSKTA KSDLWHYIQE 120 IKKVDCQKVK KQLCFTESEV PVLPHSREML PLPVPMLAPA PPPAAIGPLA EKMNPMKRAI 180 YAAQQNGTPT PNVPPLARIL APAPPLRTMS SAVSSLLAVA APSGMGRHSD AFEDDVARSG 240 RLPAEYSDYD FRSAGVTDEY DNGDHNTRSA QPPAYHDNDV MNEELAVADG IDCDADSSDY 300 VPDESDKDDS SLSSEIKKSK AGRKRRKSVS STSTTTTNTN KQKSLGVNQT TDTKLQSRPL 360 VRGGRSAWPG IQQRRTWPSV RQQQAQEWQQ QQQQQQQQQS IVPILPGQLA DKDKADHVMM 420 DAEVAPAEAV AAVCEEADDE QVYHLQQQQA EAMQAYAAMA AQEAYTAQVR RIAQARYAQA 480 AYAAQMLQAA TSMYDAYYTK ACNMMPPDVR HAVGDRMMRM QDVRRGSQES DGHPVMFQDG 540 CERELVSTLH PMSSDVHNNI NIHEAAAAAA VEEDTSKYVC EVPAGVLVMC ELSRLMIPAK 600 FAMNALSDVS SGAALRIDIC LWASPSIPGG KPTDLRFNKK GFPAKYTVAT LNKAGRTSIA 660 YYLDQLDDSF IAWVGRIKAR RFARVAVDRI CVDFWADD*

Sequence ? help Back to Top

Protein Sequence Length: 699 aa Download sequence

MSAGIRKVRW TNEEHDLLCE LVEKYGINCN WPQIADHFKG KTGKQCRERY MYHGPHIAKP  60
HPWTAEEDLL LIEGHKLYGT QWVRMNHLFP GRSDNDIKNH WNAVMRSKTA KSDLWHYIQE  120
IKKVDCQKVK KQLCFTESEV PVLPHSREML PLPVPMLAPA PPPAAIGPLA EKMNPMKRAI  180
YAAQQNGTPT PNVPPLARIL APAPPLRTMS SAVSSLLAVA APSGMGRHSD AFEDDVARSG  240
RLPAEYSDYD FRSAGVTDEY DNGDHNTRSA QPPAYHDNDV MNEELAVADG IDCDADSSDY  300
VPDESDKDDS SLSSEIKKSK AGRKRRKSVS STSTTTTNTN KQKSLGVNQT TDTKLQSRPL  360
VRGGRSAWPG IQQRRTWPSV RQQQAQEWQQ QQQQQQQQQS IVPILPGQLA DKDKADHVMM  420
DAEVAPAEAV AAVCEEADDE QVYHLQQQQA EAMQAYAAMA AQEAYTAQVR RIAQARYAQA  480
AYAAQMLQAA TSMYDAYYTK ACNMMPPDVR HAVGDRMMRM QDVRRGSQES DGHPVMFQDG  540
CERELVSTLH PMSSDVHNNI NIHEAAAAAA VEEDTSKYVC EVPAGVLVMC ELSRLMIPAK  600
FAMNALSDVS SGAALRIDIC LWASPSIPGG KPTDLRFNKK GFPAKYTVAT LNKAGRTSIA  660
YYLDQLDDSF IAWVGRIKAR RFARVAVDRI CVDFWADD*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G25230.1	7e-26	MYB family protein