PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cz06g23090.t1

Organism

Chromochloris zofingiensis

Taxonomic ID

31302

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Sphaeropleales; Chromochloridaceae; Chromochloris

Family

MYB

Protein Properties

Length: 843aa MW: 89280.8 Da PI: 6.4769

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cz06g23090.t1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	44.6	3.4e-14	17	72	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT........TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmg........kgRtlkqcksrwqkyl 48 +g W +eEd l+++vk++G g+W+ Iar ++ +gR +kqc++rw+ +l Cz06g23090.t1 17 KGGWNPEEDAMLIRLVKKFGEGNWSPIARALNeafdksedQGRIGKQCRERWNHHL 72 688*************************************************9886 PP
2	Myb_DNA-binding	55.7	1.1e-17	78	120	1	45
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 +++WT++E+ lv+a+k+lG++ W+ Iar ++ gRt++ +k++w+ Cz06g23090.t1 78 KDAWTEDEEAHLVKAHKKLGNR-WSDIARVLP-GRTENAVKNHWN 120 679*****************.*****.*********8 PP

Sequence ? help Back to Top
Protein Sequence Length: 843 aa Download sequence
MVQGSGRRRR HPLAKVKGGW NPEEDAMLIR LVKKFGEGNW SPIARALNEA FDKSEDQGRI 60 GKQCRERWNH HLRPDIKKDA WTEDEEAHLV KAHKKLGNRW SDIARVLPGR TENAVKNHWN 120 ATLRRKDGSG PENGPAVLKQ YMMEIGLIGH SSKSSRGKKR RAREGTDHVM DPSWSPRANS 180 TGTTGDVGTS SPHRFTRQRV VAKRSCANLV ASVSCSDECT SSEFSSGEEE SVEYPHNQHK 240 ANRVCVPSSE HGEDGADNGD ILANQRHQRP TIPIPGELTQ PSVAGSVWRQ DSICKHPTGP 300 QNAETAIQKL FQSRQQQQQQ QPAPVSILDI SNTDVSPCDG PTAATAANIA RAVVTECPDQ 360 STLLTTHIAS NQGAPVSVSA SLENPVSSPA VAADPACNQT PVAMALSAEA AVAPVAPAGA 420 PGATAAAVVG TQQAPTERHD SEELENTLLW LQAMDDDDAM LSGLDELGLM NGEGAVAAPD 480 ALGGPTAAQT MIPSAPVSVS NEPTVQPGLA AAALHPTVSD ISCATHCGLD AMPLPSPRCI 540 PKSQSMGALG MGAPQLSSTM MPRMISEPMI YHIPRVESVG SDVFGAGTES HHMGMDIQSN 600 VAMCNHANGL PPIRTSTASS FGMQSMASAD VHRVMSTSDL ASVITPDMPA TLSASRFGGY 660 ESHGMPPAYM GMPPHMMTPA PDVVVMLSSN PLPAMDDVLT LLAEPLPNAK KLFMEVSTFT 720 SRGPQAISPP KVMCQLASLG VDSALADAAA CLGDGPSPRS RPVPDMHKCH KALAHDTQAY 780 LSHACRAVKS QMDLGRVVVA LRMGADMAPY EASLVVAATA CSWQEATTAV RMIVTSVSPL 840 YE*

Sequence ? help Back to Top

Protein Sequence Length: 843 aa Download sequence

MVQGSGRRRR HPLAKVKGGW NPEEDAMLIR LVKKFGEGNW SPIARALNEA FDKSEDQGRI  60
GKQCRERWNH HLRPDIKKDA WTEDEEAHLV KAHKKLGNRW SDIARVLPGR TENAVKNHWN  120
ATLRRKDGSG PENGPAVLKQ YMMEIGLIGH SSKSSRGKKR RAREGTDHVM DPSWSPRANS  180
TGTTGDVGTS SPHRFTRQRV VAKRSCANLV ASVSCSDECT SSEFSSGEEE SVEYPHNQHK  240
ANRVCVPSSE HGEDGADNGD ILANQRHQRP TIPIPGELTQ PSVAGSVWRQ DSICKHPTGP  300
QNAETAIQKL FQSRQQQQQQ QPAPVSILDI SNTDVSPCDG PTAATAANIA RAVVTECPDQ  360
STLLTTHIAS NQGAPVSVSA SLENPVSSPA VAADPACNQT PVAMALSAEA AVAPVAPAGA  420
PGATAAAVVG TQQAPTERHD SEELENTLLW LQAMDDDDAM LSGLDELGLM NGEGAVAAPD  480
ALGGPTAAQT MIPSAPVSVS NEPTVQPGLA AAALHPTVSD ISCATHCGLD AMPLPSPRCI  540
PKSQSMGALG MGAPQLSSTM MPRMISEPMI YHIPRVESVG SDVFGAGTES HHMGMDIQSN  600
VAMCNHANGL PPIRTSTASS FGMQSMASAD VHRVMSTSDL ASVITPDMPA TLSASRFGGY  660
ESHGMPPAYM GMPPHMMTPA PDVVVMLSSN PLPAMDDVLT LLAEPLPNAK KLFMEVSTFT  720
SRGPQAISPP KVMCQLASLG VDSALADAAA CLGDGPSPRS RPVPDMHKCH KALAHDTQAY  780
LSHACRAVKS QMDLGRVVVA LRMGADMAPY EASLVVAATA CSWQEATTAV RMIVTSVSPL  840
YE*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G27785.1	8e-42	MYB family protein