PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cz08g00050.t1

Organism

Chromochloris zofingiensis

Taxonomic ID

31302

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Sphaeropleales; Chromochloridaceae; Chromochloris

Family

ARR-B

Protein Properties

Length: 524aa MW: 54618.2 Da PI: 6.7682

Description

ARR-B family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cz08g00050.t1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	91.8	5.7e-29	115	168	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kpr++W+ e+H++Fv+av+qL G++kA+Pk+ilelm+v+gLt+e+v+SHLQkYRl Cz08g00050.t1 115 KPRVVWSVEMHQQFVQAVNQL-GIDKAVPKKILELMNVDGLTRENVASHLQKYRL 168 79*****************.******************************8 PP
2	Myb_DNA-binding	36.5	1.2e-11	117	167	1	48
TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 r W+ e ++++v+av+qlG + +k+I + m+ g+t++++ s++qky+ Cz08g00050.t1 117 RVVWSVEMHQQFVQAVNQLGIDkaVPKKILELMNvDGLTRENVASHLQKYR 167 678***********************************************7 PP
3	Response_reg	27	2.2e-10	1	53	56	109
SEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTTESEEEESS--HHHHHH CS Response_reg 56 mdGlellkeireeepklpiivvtahgeeedalealkaGakdflsKpfdpeelvk 109 mdG++ll++ e +lp+i+++++ge +++ + + Ga dfl Kp+ +eel++ Cz08g00050.t1 1 MDGFKLLETVGLE-LDLPVIMMSSNGEHTTVMRGVTHGACDFLIKPVRIEELRN 53 8999999999543.37************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 524 aa Download sequence
MDGFKLLETV GLELDLPVIM MSSNGEHTTV MRGVTHGACD FLIKPVRIEE LRNIWQHVIR 60 RTRHPVFRDL EPDDHEGGDY EASKKRKDLY RGENSSGSGG AGGLERDDDG SASKKPRVVW 120 SVEMHQQFVQ AVNQLGIDKA VPKKILELMN VDGLTRENVA SHLQKYRLYL KRVQGVQAPF 180 GLPNIQLPRQ TSSKGAGSSS QQQHHQQQQH QQQHQHQHQT ALGTGQQQSH QLQPCPVSTA 240 TPVMPSPDAM VAASMMSSQA MAAMAPGVMN PMTAMNSMMA GLNPNMMGMA AGLGLAGLGI 300 GGMAGHPVPN PMLAGMGPMG LGLPPPPGMP PPPPGMPPGM PPGMPPGMPA MMQGLSMAGM 360 SHLAAAGMRP PPGALGGHLG GPGLSPFGPP PPPGADPANM MANMSSMMAN MQAALAFQAD 420 AAAAAQHQAA STGSVAPGRQ QQVHQHQQAV GMAVDDAAAF PSPGCRPNGS ADAGAQSAAE 480 PNDFSRVFDD PFAQPAASPS GAAAAGSNEA PGMDDFLDFF LKS*

Sequence ? help Back to Top

Protein Sequence Length: 524 aa Download sequence

MDGFKLLETV GLELDLPVIM MSSNGEHTTV MRGVTHGACD FLIKPVRIEE LRNIWQHVIR  60
RTRHPVFRDL EPDDHEGGDY EASKKRKDLY RGENSSGSGG AGGLERDDDG SASKKPRVVW  120
SVEMHQQFVQ AVNQLGIDKA VPKKILELMN VDGLTRENVA SHLQKYRLYL KRVQGVQAPF  180
GLPNIQLPRQ TSSKGAGSSS QQQHHQQQQH QQQHQHQHQT ALGTGQQQSH QLQPCPVSTA  240
TPVMPSPDAM VAASMMSSQA MAAMAPGVMN PMTAMNSMMA GLNPNMMGMA AGLGLAGLGI  300
GGMAGHPVPN PMLAGMGPMG LGLPPPPGMP PPPPGMPPGM PPGMPPGMPA MMQGLSMAGM  360
SHLAAAGMRP PPGALGGHLG GPGLSPFGPP PPPGADPANM MANMSSMMAN MQAALAFQAD  420
AAAAAQHQAA STGSVAPGRQ QQVHQHQQAV GMAVDDAAAF PSPGCRPNGS ADAGAQSAAE  480
PNDFSRVFDD PFAQPAASPS GAAAAGSNEA PGMDDFLDFF LKS*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G16110.1	3e-62	ARR-B family protein