PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cz08g24200.t1
Organism
Chromochloris zofingiensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Sphaeropleales; Chromochloridaceae; Chromochloris
Family C2H2
Protein Properties Length: 134aa    MW: 14974.2 Da    PI: 9.5605
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cz08g24200.t1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H216.42.5e-051435323
                   ETTTTEEESSHHHHHHHHHH.T CS
        zf-C2H2  3 CpdCgksFsrksnLkrHirt.H 23
                   C +C++ Fs+  +L++H+++ H
  Cz08g24200.t1 14 CFYCDRLFSDEATLVQHQKNkH 35
                   99*****************988 PP
2zf-C2H216.13.2e-053656121
                   EEETTTTEEESSHHHHHHHHH CS
        zf-C2H2  1 ykCpdCgksFsrksnLkrHir 21
                   ykCpdC++  ++   L++H  
  Cz08g24200.t1 36 YKCPDCNRKLNTAQGLVVHAY 56
                   9******************76 PP
Sequence ? help Back to Top
Protein Sequence    Length: 134 aa     Download sequence    
MGKKKKRIDD KPWCFYCDRL FSDEATLVQH QKNKHYKCPD CNRKLNTAQG LVVHAYQVHK  60
LNITAIPGAK PGRESTDREI FGMAGIPEGA RPGAPFGEGE RLRHLALHGL TPGIAFHDTR  120
NVCLTHQPMP YNV*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1434KKKRIDDKPWCFYCDRLFSDEATLVQHQKNK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G30970.16e-37C2H2 family protein