PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cz09g15150.t1
Organism
Chromochloris zofingiensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Sphaeropleales; Chromochloridaceae; Chromochloris
Family C3H
Protein Properties Length: 248aa    MW: 25030.6 Da    PI: 8.5877
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cz09g15150.t1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH24.16.4e-081329926
                   GGGTS--TTTTT-SS-SS CS
        zf-CCCH  9 fartGtCkyGdrCkFaHg 26
                   f++ G CkyGd+CkF+H+
  Cz09g15150.t1 13 FHK-GLCKYGDSCKFSHD 29
                   999.*************7 PP
2zf-CCCH41.91.7e-135984227
                   -S---SGGGGTS--TTTTT-SS-SSS CS
        zf-CCCH  2 ktelCrffartGtCkyGdrCkFaHgp 27
                   kt+lC  f++tGtC yGd C+FaH++
  Cz09g15150.t1 59 KTRLCAKFMQTGTCGYGDACSFAHSE 84
                   9***********************95 PP
Sequence ? help Back to Top
Protein Sequence    Length: 248 aa     Download sequence    
MCCNAPAVHV YSFHKGLCKY GDSCKFSHDL VPAGGAGGGD HRPDIKPPGN DDLKEVLRKT  60
RLCAKFMQTG TCGYGDACSF AHSEAELRPP VDFNKPNRGP VAGPGPGLLH PQQQAALVGM  120
GGMPPPMAPP PHHHHPPTAG GPPVGMPPAA TAGVPGPRPP AGPPPPAGPA PPPGGPPPDI  180
AGSAHAFATV STSGPSPVAG KSDVSYLDRV RAICGILQIG NAAELSQQKP AALQSAIQSI  240
KDGKAFR*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G19360.13e-08C3H family protein