PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cz09g23280.t1

Organism

Chromochloris zofingiensis

Taxonomic ID

31302

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Sphaeropleales; Chromochloridaceae; Chromochloris

Family

MYB_related

Protein Properties

Length: 983aa MW: 100544 Da PI: 7.2286

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cz09g23280.t1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	47.8	3.2e-15	63	107	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 r rWT eE+ ++++a +++G W++I +++g ++t+ q++s+ qk+ Cz09g23280.t1 63 RERWTDEEHAKFLEALRLYGRA-WRKIEEYVG-TKTAVQIRSHAQKF 107 78****************88.*****.**********98 PP

Sequence ? help Back to Top
Protein Sequence Length: 983 aa Download sequence
MDDSNPYANL IVNGLNPLSG GGNAFRPVSG QAFEGAGIPY YGEQPENGKQ LKARKPYTIT 60 KQRERWTDEE HAKFLEALRL YGRAWRKIEE YVGTKTAVQI RSHAQKFFSK IERKKEAGEH 120 TGSENEIDIP PPRPKRKPSR PYPRKDNGGD ASGNGDGSNN NGTSSSMHLT HLQAPLTSGL 180 PTSTNEVTDA TVAAVAAAAS AAAAAAAAAV VAAAGQQVQA HMQVHPPSGF PFFGVPPSLL 240 AQMSAASTPA MEQAVAGGQF GGHGAFTAFK APATAMLPAD VDIKPNPGAL VEATATTDGT 300 HVSADAHTSR GSDGDSACSR ETANLETGPA QVMDASWQAL MHKQGLNTQV NGHVAWPQLD 360 HLAASQLPWA LSQGLQAWNQ QVLSPQGQTP TNRTNPLYLL GILDAAKGMQ QLATVTTPVD 420 GTATVSKGRH GPRSADSGGL GAGGKRGHDS TGELGPTRKK AQSSAGGGTD EDAAGRDQQE 480 DEQAPDSPSI EDHVTKAPSQ PSGTHTTTHG GGNTSGSNES DRREAEGSNP TTDGNGYSSG 540 NGNGNGDSSG NGNGSGNGNG HSNGNDYSTK DSNTNGNGHA NGNGHTNGNS SSGNGTSKLQ 600 GDPSGAHHHH HHNSTAGHNH KHQQGWQPPL PSGGGPTSGS TRMHTHHHHH HHHHSQHPEG 660 SNGHGNGASG IGAVTRYRDQ DEGRSSSDLD GPPAAGPVSH NPHAHNTVDT SALQAMVASL 720 QAQAGLVNPF LLQQAYGAVA ATAQNIMAGL TSRTLGLQHQ QQQHHQQQQQ VPNASGLGLP 780 GFNGYNALGG GLGGLAATAQ LPASYHVAAA AAAGKIAPPA NPLLPQFTTP AQAAGLAAVA 840 GNLNGFGGYG GAMFNTYNQL AAAKANQTQA SGLITGLDQS PMHASSYGQL QSLGRQLATA 900 SSGYAPQDGM MLSAGRLPSS SQCGIPLVPA TAHTTTVSAG GGGGDIGQLQ LPRRGDSEGA 960 PVGTRLALGH DNSMLPCKKR SM*

Sequence ? help Back to Top

Protein Sequence Length: 983 aa Download sequence

MDDSNPYANL IVNGLNPLSG GGNAFRPVSG QAFEGAGIPY YGEQPENGKQ LKARKPYTIT  60
KQRERWTDEE HAKFLEALRL YGRAWRKIEE YVGTKTAVQI RSHAQKFFSK IERKKEAGEH  120
TGSENEIDIP PPRPKRKPSR PYPRKDNGGD ASGNGDGSNN NGTSSSMHLT HLQAPLTSGL  180
PTSTNEVTDA TVAAVAAAAS AAAAAAAAAV VAAAGQQVQA HMQVHPPSGF PFFGVPPSLL  240
AQMSAASTPA MEQAVAGGQF GGHGAFTAFK APATAMLPAD VDIKPNPGAL VEATATTDGT  300
HVSADAHTSR GSDGDSACSR ETANLETGPA QVMDASWQAL MHKQGLNTQV NGHVAWPQLD  360
HLAASQLPWA LSQGLQAWNQ QVLSPQGQTP TNRTNPLYLL GILDAAKGMQ QLATVTTPVD  420
GTATVSKGRH GPRSADSGGL GAGGKRGHDS TGELGPTRKK AQSSAGGGTD EDAAGRDQQE  480
DEQAPDSPSI EDHVTKAPSQ PSGTHTTTHG GGNTSGSNES DRREAEGSNP TTDGNGYSSG  540
NGNGNGDSSG NGNGSGNGNG HSNGNDYSTK DSNTNGNGHA NGNGHTNGNS SSGNGTSKLQ  600
GDPSGAHHHH HHNSTAGHNH KHQQGWQPPL PSGGGPTSGS TRMHTHHHHH HHHHSQHPEG  660
SNGHGNGASG IGAVTRYRDQ DEGRSSSDLD GPPAAGPVSH NPHAHNTVDT SALQAMVASL  720
QAQAGLVNPF LLQQAYGAVA ATAQNIMAGL TSRTLGLQHQ QQQHHQQQQQ VPNASGLGLP  780
GFNGYNALGG GLGGLAATAQ LPASYHVAAA AAAGKIAPPA NPLLPQFTTP AQAAGLAAVA  840
GNLNGFGGYG GAMFNTYNQL AAAKANQTQA SGLITGLDQS PMHASSYGQL QSLGRQLATA  900
SSGYAPQDGM MLSAGRLPSS SQCGIPLVPA TAHTTTVSAG GGGGDIGQLQ LPRRGDSEGA  960
PVGTRLALGH DNSMLPCKKR SM*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G17300.1	4e-32	MYB_related family protein