PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cz10g07080.t1

Organism

Chromochloris zofingiensis

Taxonomic ID

31302

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Sphaeropleales; Chromochloridaceae; Chromochloris

Family

MYB

Protein Properties

Length: 510aa MW: 56618.6 Da PI: 10.1418

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cz10g07080.t1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	50.2	5.8e-16	7	50	4	48
S-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 4 WTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 WT eEde+l d+v+++G+++W+ Ia+++ ++ kqc+ rw ++l Cz10g07080.t1 7 WTSEEDEQLRDLVAEYGPKRWAVIAKKLA-TKGSKQCRRRWKNFL 50 ***************************.***********97 PP
2	Myb_DNA-binding	57.6	2.9e-18	56	98	1	45
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 +g WT+eEd+ll+++++++G++ W+ Ia+ +g gRt++ +k+rw+ Cz10g07080.t1 56 KGGWTEEEDDLLLEGHRKYGNK-WTEIAKLVG-GRTDNAVKNRWH 98 688*****************.*****.*********7 PP

Sequence ? help Back to Top
Protein Sequence Length: 510 aa Download sequence
MPLGAVWTSE EDEQLRDLVA EYGPKRWAVI AKKLATKGSK QCRRRWKNFL NMEVRKGGWT 60 EEEDDLLLEG HRKYGNKWTE IAKLVGGRTD NAVKNRWHAI CKKHERTRPD RSRHAERFND 120 HSLFSVQRFI QKDVPQRYRH TPSARMPSPT RRDRLSYQAS HVRAGSPLPH PGPDVVQRKP 180 GLSIAIPNSN PVEAQVTRSN AGLEIRVFKD LLTPADAQFA RELNSMDIPI RIRMEEEPPL 240 STSRQAAINA LSALTSPTET PMADLAEVYK MLQSCLTPHT ARHGIGRATS RSPGLHELPS 300 VKAEPGMQNH DRHHHQQQEQ QQQQQQQQQQ QPQQHISRSA TDAFHDGHRQ LLTKLLGKAQ 360 PDPGMLGKAP PGCAPDVARP PPHRSETPAG FRPPPPPAGF RPPCPPILPP IPGMLAPGGP 420 LNFPMEVLLS PGLGQADLSM LLDLLSSSDL PPTPCLPPGM GHPGYIPPYP SMNNQLGAAM 480 GAGELPRGMR GMPHHYMDMR DIRARGMGH*

Sequence ? help Back to Top

Protein Sequence Length: 510 aa Download sequence

MPLGAVWTSE EDEQLRDLVA EYGPKRWAVI AKKLATKGSK QCRRRWKNFL NMEVRKGGWT  60
EEEDDLLLEG HRKYGNKWTE IAKLVGGRTD NAVKNRWHAI CKKHERTRPD RSRHAERFND  120
HSLFSVQRFI QKDVPQRYRH TPSARMPSPT RRDRLSYQAS HVRAGSPLPH PGPDVVQRKP  180
GLSIAIPNSN PVEAQVTRSN AGLEIRVFKD LLTPADAQFA RELNSMDIPI RIRMEEEPPL  240
STSRQAAINA LSALTSPTET PMADLAEVYK MLQSCLTPHT ARHGIGRATS RSPGLHELPS  300
VKAEPGMQNH DRHHHQQQEQ QQQQQQQQQQ QPQQHISRSA TDAFHDGHRQ LLTKLLGKAQ  360
PDPGMLGKAP PGCAPDVARP PPHRSETPAG FRPPPPPAGF RPPCPPILPP IPGMLAPGGP  420
LNFPMEVLLS PGLGQADLSM LLDLLSSSDL PPTPCLPPGM GHPGYIPPYP SMNNQLGAAM  480
GAGELPRGMR GMPHHYMDMR DIRARGMGH*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G14350.1	5e-34	MYB family protein