PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cz10g08040.t1
Organism
Chromochloris zofingiensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Sphaeropleales; Chromochloridaceae; Chromochloris
Family NF-YB
Protein Properties Length: 156aa    MW: 16858.7 Da    PI: 4.5954
Description NF-YB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cz10g08040.t1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YB47.44.7e-153107397
          NF-YB   3 eqdrflPianvsrimkkvlPa..........nakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylk 88 
                    e d  lP + v r++k+ l +          + +i kda     e +  fi ++t+ a+d c++ kr+ti++dd+l al +l f + v +lk  l+
  Cz10g08040.t1   3 EVDTDLPKTLVKRLVKNKLAGlvdssdgakrEVQINKDALLAFSESAKVFINYLTTTANDICHEHKRQTISADDVLQALDDLDFVEMVPQLKDALE 98 
                    5567777777778887777651111111111345777777777899999*********************************************** PP

          NF-YB  89 kyrelegek 97 
                     +r++ ++k
  Cz10g08040.t1  99 AFRKTTKDK 107
                    ****99886 PP
Sequence ? help Back to Top
Protein Sequence    Length: 156 aa     Download sequence    
MAEVDTDLPK TLVKRLVKNK LAGLVDSSDG AKREVQINKD ALLAFSESAK VFINYLTTTA  60
NDICHEHKRQ TISADDVLQA LDDLDFVEMV PQLKDALEAF RKTTKDKNQK KAEQNKKRKA  120
QADQGPGQAT GAEDDAGDAD TAADVDAEDE HGGCT*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G27470.12e-18NF-YB family protein