PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cz10g11010.t1

Organism

Chromochloris zofingiensis

Taxonomic ID

31302

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Sphaeropleales; Chromochloridaceae; Chromochloris

Family

MYB_related

Protein Properties

Length: 844aa MW: 88876.1 Da PI: 7.0641

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cz10g11010.t1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	23.8	1e-07	12	59	4	47
S-HHHHHHHHHHHHHTTTT-HHHHHHHHT....TTS-HHHHHHHHHHH CS Myb_DNA-binding 4 WTteEdellvdavkqlGggtWktIartmg....kgRtlkqcksrwqky 47 W + E++ l +vk++G g W++I +R++ q+k++w+++ Cz10g11010.t1 12 WDQPEEDALRAGVKKHGLGAWERIRTDPDfsalVNRSGVQLKDKWRNL 59 8899******************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 844 aa Download sequence
MGKSIAREYR IWDQPEEDAL RAGVKKHGLG AWERIRTDPD FSALVNRSGV QLKDKWRNLV 60 KFRHITPDET QTLQPKTSGP WHKKYISASS TAARVGHSAR SARKDGKASS PNQQTTASGM 120 KSDQEQVEDE GSDRQPKRKS ARAAAAARRS YLDMEAAFDD DDSIDETGRA STQKKRKLKE 180 RPGSEDRRFG IYDRRRYAEG MGPAGCGDSG SSSEHTGFDE HTYVVECPCG VTYDDGQMMI 240 ECETCKAWAH NACLQAQMEA EPHRYQFDFG QYLCYHCQCA LTAHHTAPPS SAGCTAAGFG 300 AHPADVLHLL QQQQQGSGSQ QSVDSMDGHP PGRGWPADLV DVAAAMEGAY DSQDDEDDDD 360 GMVDIDPVLL LILQGSLYVN KKQRNAGPSR KPPMRWCKGL VDWLELQKQA GAIPAGELAA 420 YVMTHDGRHH PAAILPGHPK WAAAVAAVAA KAPQHAGRRP RSRGGRAATA AGSCSRTAAT 480 AGDGRGHRRH ASPSAHMFIR NSSHSRERDL PAVMAGGSDG GGTTITRAVA HKGTRNFDQN 540 IIRDGGGGAG ASSSYGERGY RGGDLSATTA HRGLPAAGAA RGYLPAPGDA DGDGGDDLTG 600 DVLAGVLQPG SPNRITGELF DNVDRDHEEA ADQDAPVMSH SSHQPCKGAG HKAAGSAGGH 660 PHHHQGGRGG GRGGAGHWSA HGHDFDDMDE STKAALDGML MSSLDGGGGT GHPPHHHHHH 720 ALMNPLSANP LRPDSSSLMG TFIQAAALGM PPASWGMPAL TLEPAGRGAQ PSGSSVYKKA 780 AGMYGAAAGA PGAGSSKFVG LSSSGDLVHP DTSLALQIAD LRPMTPDAYT LLRAPTPEVG 840 VVG*

Sequence ? help Back to Top

Protein Sequence Length: 844 aa Download sequence

MGKSIAREYR IWDQPEEDAL RAGVKKHGLG AWERIRTDPD FSALVNRSGV QLKDKWRNLV  60
KFRHITPDET QTLQPKTSGP WHKKYISASS TAARVGHSAR SARKDGKASS PNQQTTASGM  120
KSDQEQVEDE GSDRQPKRKS ARAAAAARRS YLDMEAAFDD DDSIDETGRA STQKKRKLKE  180
RPGSEDRRFG IYDRRRYAEG MGPAGCGDSG SSSEHTGFDE HTYVVECPCG VTYDDGQMMI  240
ECETCKAWAH NACLQAQMEA EPHRYQFDFG QYLCYHCQCA LTAHHTAPPS SAGCTAAGFG  300
AHPADVLHLL QQQQQGSGSQ QSVDSMDGHP PGRGWPADLV DVAAAMEGAY DSQDDEDDDD  360
GMVDIDPVLL LILQGSLYVN KKQRNAGPSR KPPMRWCKGL VDWLELQKQA GAIPAGELAA  420
YVMTHDGRHH PAAILPGHPK WAAAVAAVAA KAPQHAGRRP RSRGGRAATA AGSCSRTAAT  480
AGDGRGHRRH ASPSAHMFIR NSSHSRERDL PAVMAGGSDG GGTTITRAVA HKGTRNFDQN  540
IIRDGGGGAG ASSSYGERGY RGGDLSATTA HRGLPAAGAA RGYLPAPGDA DGDGGDDLTG  600
DVLAGVLQPG SPNRITGELF DNVDRDHEEA ADQDAPVMSH SSHQPCKGAG HKAAGSAGGH  660
PHHHQGGRGG GRGGAGHWSA HGHDFDDMDE STKAALDGML MSSLDGGGGT GHPPHHHHHH  720
ALMNPLSANP LRPDSSSLMG TFIQAAALGM PPASWGMPAL TLEPAGRGAQ PSGSSVYKKA  780
AGMYGAAAGA PGAGSSKFVG LSSSGDLVHP DTSLALQIAD LRPMTPDAYT LLRAPTPEVG  840
VVG*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G72740.1	1e-11	MYB_related family protein