PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cz10g12010.t1

Organism

Chromochloris zofingiensis

Taxonomic ID

31302

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Sphaeropleales; Chromochloridaceae; Chromochloris

Family

G2-like

Protein Properties

Length: 409aa MW: 42874 Da PI: 6.9138

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cz10g12010.t1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	89.8	2.5e-28	283	336	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 +prl+Wtp+LH+rF eav +L G ekA+Pkti+++m+v+gLt+e+v+SHLQkYRl Cz10g12010.t1 283 RPRLVWTPQLHKRFEEAVIKL-GVEKAVPKTIMQIMNVDGLTRENVASHLQKYRL 336 59*****************.******************************8 PP
2	Myb_DNA-binding	44.4	3.9e-14	285	335	1	48
TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 r+ WT+++++++ +av +lG + +ktI++ m+ g+t++++ s++qky+ Cz10g12010.t1 285 RLVWTPQLHKRFEEAVIKLGVEkaVPKTIMQIMNvDGLTRENVASHLQKYR 335 789***********************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 409 aa Download sequence
MRGVVSLYAT RLSSVSAAPR MDTTPLQGVC SWGFDIEVPI KMPTISYGRA TGWETAYQLP 60 TALELLPLHQ ALIPPALAFA FGITSPHEHS QGTCSVPLSN SKDFSAAPQP KPVWQKTVFE 120 HMAAQAPSST TNVGPATTIA SNKREREESV KDLMHGRTSS DVTQLSAPSS HISSQQMLPA 180 PLVPGMAPGQ GLFPSFPGPA AFPGPYSGYP LNHPLLPYYG SGPAVSGMTG SYGYPPAMFP 240 GVMDPRQLHS PSSQQPATAA APLRSSGDDD DVGDDTRARA LKRPRLVWTP QLHKRFEEAV 300 IKLGVEKAVP KTIMQIMNVD GLTRENVASH LQKYRLQLKR QGSDGEVVDD DPAGATSSRR 360 PSAGAHDGAR CTGDSTAPQQ DGSDSAPGAA SGSGAAGSND EGSGVSQA*

Sequence ? help Back to Top

Protein Sequence Length: 409 aa Download sequence

MRGVVSLYAT RLSSVSAAPR MDTTPLQGVC SWGFDIEVPI KMPTISYGRA TGWETAYQLP  60
TALELLPLHQ ALIPPALAFA FGITSPHEHS QGTCSVPLSN SKDFSAAPQP KPVWQKTVFE  120
HMAAQAPSST TNVGPATTIA SNKREREESV KDLMHGRTSS DVTQLSAPSS HISSQQMLPA  180
PLVPGMAPGQ GLFPSFPGPA AFPGPYSGYP LNHPLLPYYG SGPAVSGMTG SYGYPPAMFP  240
GVMDPRQLHS PSSQQPATAA APLRSSGDDD DVGDDTRARA LKRPRLVWTP QLHKRFEEAV  300
IKLGVEKAVP KTIMQIMNVD GLTRENVASH LQKYRLQLKR QGSDGEVVDD DPAGATSSRR  360
PSAGAHDGAR CTGDSTAPQQ DGSDSAPGAA SGSGAAGSND EGSGVSQA*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G05090.1	4e-30	G2-like family protein