PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cz10g17100.t1

Organism

Chromochloris zofingiensis

Taxonomic ID

31302

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Sphaeropleales; Chromochloridaceae; Chromochloris

Family

MYB

Protein Properties

Length: 871aa MW: 91405.2 Da PI: 6.0577

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cz10g17100.t1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	58.8	1.2e-18	28	73	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 r +WT+eEd++l+++v+++G+ +W++I++ +g gR +k+c++rw + Cz10g17100.t1 28 RTSWTPEEDQKLIELVEKYGPQNWTLISQSLG-GRNGKSCRLRWCNQ 73 679***************************.*********985 PP
2	Myb_DNA-binding	46.8	6.6e-15	80	125	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 + ++++eE +++++ +++lG++ W+ Ia+ ++ gRt++ +k++w+ yl Cz10g17100.t1 80 KEPFSEEEKKIIIEKHAELGNK-WAQIAKFLP-GRTDNAIKNYWNGYL 125 579*****************.*****.*********9886 PP

Sequence ? help Back to Top
Protein Sequence Length: 871 aa Download sequence
MDRSRPDDCD SDSKSSTTEN DKQAVNKRTS WTPEEDQKLI ELVEKYGPQN WTLISQSLGG 60 RNGKSCRLRW CNQLNPGVKK EPFSEEEKKI IIEKHAELGN KWAQIAKFLP GRTDNAIKNY 120 WNGYLKRQVE TGKEGLSHKR MKMEQQGHAA HPLQQQMMGM EGFGLGALGN AWQALHAAAQ 180 GIPQPAPGTP GGLSGLNAWT AATAAAAQAA ANGRADQLAN LSTAQAAAAA AAAAAAAAGG 240 GAAGPLGLGG VSDPVALAQA IFGSQASQLL GPQAAALAAA AAGANQPGLG AMSMVGQMQL 300 LGTLYQMLGR QLVGGGGNTA ALAALLGAAG EGVAAEEREG SGAAASPADV QRAFMAMAPF 360 LGGGSAMPES HVLAALGSNP LLALQLAGLQ GGFGAGGPPK DPVALQALLM NSGLSGAFRG 420 GAPLWHSGAQ GAEEPVHSAG GSRGSAHSDD HPSTSGNESG RFMKGKSRYL DMMSLVARNA 480 ANRTQQMGSP HSTDTAEAKQ VQAGSSNHDD RNTPDHDSDE MDPQHSRLIK HERGSGRTSS 540 LLGSRSRAAR QQDADYNEAE QAVGGRAHNY NGKPYGSRYP PEAVAALQQL MRPDFDQIKD 600 EAEAASGATA NDDDDDVNAD EDGVEALLAL GASGHRHSEQ DGGDDDDQQY DDEDDGQQDD 660 VSMDDDEDNR SRGSRGYRGG AQNQDRSRSP FVVPRHHPRH MIQEGRPAGA PAPRVVYRPS 720 PTAARSYSRS PARATAPRSQ STGGGQVRRQ LKRPADGNHH WARSTPREVG NPVQGKPRYI 780 TYTAPRGRPM DLEEMKNRIA SRVGDGADGK NNNNDDDDGD DGVDHEATEE NTAGQEQHAT 840 PAAASAVNHE FLRNAWMLMQ QARLQGAQAV *

Sequence ? help Back to Top

Protein Sequence Length: 871 aa Download sequence

MDRSRPDDCD SDSKSSTTEN DKQAVNKRTS WTPEEDQKLI ELVEKYGPQN WTLISQSLGG  60
RNGKSCRLRW CNQLNPGVKK EPFSEEEKKI IIEKHAELGN KWAQIAKFLP GRTDNAIKNY  120
WNGYLKRQVE TGKEGLSHKR MKMEQQGHAA HPLQQQMMGM EGFGLGALGN AWQALHAAAQ  180
GIPQPAPGTP GGLSGLNAWT AATAAAAQAA ANGRADQLAN LSTAQAAAAA AAAAAAAAGG  240
GAAGPLGLGG VSDPVALAQA IFGSQASQLL GPQAAALAAA AAGANQPGLG AMSMVGQMQL  300
LGTLYQMLGR QLVGGGGNTA ALAALLGAAG EGVAAEEREG SGAAASPADV QRAFMAMAPF  360
LGGGSAMPES HVLAALGSNP LLALQLAGLQ GGFGAGGPPK DPVALQALLM NSGLSGAFRG  420
GAPLWHSGAQ GAEEPVHSAG GSRGSAHSDD HPSTSGNESG RFMKGKSRYL DMMSLVARNA  480
ANRTQQMGSP HSTDTAEAKQ VQAGSSNHDD RNTPDHDSDE MDPQHSRLIK HERGSGRTSS  540
LLGSRSRAAR QQDADYNEAE QAVGGRAHNY NGKPYGSRYP PEAVAALQQL MRPDFDQIKD  600
EAEAASGATA NDDDDDVNAD EDGVEALLAL GASGHRHSEQ DGGDDDDQQY DDEDDGQQDD  660
VSMDDDEDNR SRGSRGYRGG AQNQDRSRSP FVVPRHHPRH MIQEGRPAGA PAPRVVYRPS  720
PTAARSYSRS PARATAPRSQ STGGGQVRRQ LKRPADGNHH WARSTPREVG NPVQGKPRYI  780
TYTAPRGRPM DLEEMKNRIA SRVGDGADGK NNNNDDDDGD DGVDHEATEE NTAGQEQHAT  840
PAAASAVNHE FLRNAWMLMQ QARLQGAQAV *

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G67300.1	8e-35	MYB family protein